Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05459 and BSU35800
See
Amino acid alignment /
Visit
BSNT_05459 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_05459___gerBA.1.22522.seq
# -bsequence dna-align/BSU35800___gerBA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05459___gerBA-BSU35800___gerBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05459___gerBA-BSU35800___gerBA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05459___gerBA
# 2: BSU35800___gerBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1453
# Identity: 1199/1453 (82.5%)
# Similarity: 1199/1453 (82.5%)
# Gaps: 2/1453 ( 0.1%)
# Score: 4967.0
#
#
#=======================================
BSNT_05459___ 1 ATGCAAATCGACTCTGATCTCCAACGCAATATAGAGACATTGAAAAAAAA 50
|||||||||||||||||||||||...||||.||||.|||.|||||||||.
BSU35800___ge 1 ATGCAAATCGACTCTGATCTCCAGAACAATTTAGACACACTGAAAAAAAC 50
BSNT_05459___ 51 GTTGGGACAAAACGACGATATCATGTTTTATACGTTTTCATTTGGAGGCA 100
.||||||||||||||||||||.|||||||||||.|||.|.||.||||..|
BSU35800___ge 51 ATTGGGACAAAACGACGATATGATGTTTTATACATTTGCTTTCGGAGATA 100
BSNT_05459___ 101 GCAGACAGAAAGCGTGCCTACTGTATATTGACGGTTTGACAGAAAATAAA 150
|||||||.||.|||||..|||||||||||||||||.|||||||.||||||
BSU35800___ge 101 GCAGACAAAAGGCGTGTTTACTGTATATTGACGGTCTGACAGAGAATAAA 150
BSNT_05459___ 151 CTTCTGGCGCAATACGTCATTTCTCCATTACAAAAAGAAGCGTTAGACAA 200
.|.|||||||||||||||||||||||.|||||||||||.|||||.|.|.|
BSU35800___ge 151 ATGCTGGCGCAATACGTCATTTCTCCTTTACAAAAAGAGGCGTTGGCCCA 200
BSNT_05459___ 201 AAAAGAGGGCTTGATTGAAGATTTATCCGCTTTCTTTTTCGGCTATCATC 250
.||.||..|||.|||||||||.||||||||.||.||||||||||.|||.|
BSU35800___ge 201 TAAGGAATGCTCGATTGAAGACTTATCCGCCTTTTTTTTCGGCTTTCACC 250
BSNT_05459___ 251 ACAATGTAATCTCTACTATAAAGGAAATACAGCAGCTTATTTTTTCCGGA 300
|||..||..|.|||||.||.||.||||||.|||||||..|||||||.||.
BSU35800___ge 251 ACAGCGTTGTTTCTACAATGAAAGAAATAGAGCAGCTCGTTTTTTCAGGG 300
BSNT_05459___ 301 CATGCCATCTTGCTGGCCGATGGATACAGCGGAGGGCTGGCTTTTGATAC 350
||.|||||.|||||.||.|||||.||..|||||||..|.|||||.||.||
BSU35800___ge 301 CAAGCCATTTTGCTCGCTGATGGCTATCGCGGAGGATTAGCTTTCGACAC 350
BSNT_05459___ 351 GAAAACATTCATGACGCGC-GCCTTTGAAGAACCTTCCTCTGAAATCGTA 399
.||..||.||...||.||| |.| ||||.|||||.|||||.|||.||||.
BSU35800___ge 351 AAAGTCAGTCGCAACACGCAGTC-TTGATGAACCCTCCTCCGAAGTCGTG 399
BSNT_05459___ 400 GAACGCGGTCCGAAGATTGGCTTTATTGAAAATCTCCGGACAAACACGGC 449
||||||||.||.||.||.||.|||||||||||.||.||||||||||||||
BSU35800___ge 400 GAACGCGGCCCTAAAATAGGATTTATTGAAAAGCTGCGGACAAACACGGC 449
BSNT_05459___ 450 GCTTTTACGAGAGCGGACGAGTGACCCTAATCTCATCATAAAAGAAATGA 499
||||||.||.||.|||||||||||.|||||||||.||||.||||||||||
BSU35800___ge 450 GCTTTTGCGTGAACGGACGAGTGATCCTAATCTCGTCATCAAAGAAATGA 499
BSNT_05459___ 500 CGATAGGCAAAAGGACAAAAAAAAAGATAGCTGTCGCATATATTCAGGAT 549
|..|.||.||||||||.|||||.||.||.||||||||.||||||||||||
BSU35800___ge 500 CACTCGGAAAAAGGACCAAAAAGAAAATCGCTGTCGCTTATATTCAGGAT 549
BSNT_05459___ 550 ATTGCCCCTGATTATGTCGTAAAAGAAGTGTTTAAACGCCTAAAATCCAT 599
||.|||||.|||||||||||.|||||||||||||||.|.||.|||||..|
BSU35800___ge 550 ATCGCCCCAGATTATGTCGTCAAAGAAGTGTTTAAAAGGCTGAAATCAGT 599
BSNT_05459___ 600 CATAACAGATGATTTGCCGGAATCAGGCACACTTGAGCAGCTCATTGAAG 649
||..|.||||.|||||||||||||.||.||.|||||.|||||.|||||||
BSU35800___ge 600 CAATATAGATAATTTGCCGGAATCGGGGACGCTTGAACAGCTGATTGAAG 649
BSNT_05459___ 650 ATGAACCTTTTTCGATCTTTCCGACGATCTTAAGTACAGAGCGTCCAGAT 699
|.|||||.|||||.||.||.||.||.||.|||||.|||||.||.||.||.
BSU35800___ge 650 ACGAACCATTTTCAATTTTCCCCACAATATTAAGCACAGAACGACCGGAC 699
BSNT_05459___ 700 CGTGTAGAAAGCTCATTGTTGGAAGGCCGGGTTTCCATTTTGGTGGATGG 749
||.||.|||||.||..|.||.|||||.||.||.|||||.||.||||||||
BSU35800___ge 700 CGGGTCGAAAGTTCTCTATTAGAAGGGCGAGTGTCCATATTAGTGGATGG 749
BSNT_05459___ 750 CACGCCGTTTGCACTCGTTGTCCCCGCAACGCTTGATGAATTTATTCATT 799
.|||||||||||..|..||||.||.||.|||.||||.|||||||||||||
BSU35800___ge 750 TACGCCGTTTGCTTTGATTGTACCGGCTACGGTTGACGAATTTATTCATT 799
BSNT_05459___ 800 CACCGGATGATTACAGCCAGCGCTGGATTACAATGTCACTTATTCGTTTG 849
|.||.|||||||||||||||||||||||..|||||||||||.|.||..|.
BSU35800___ge 800 CGCCCGATGATTACAGCCAGCGCTGGATCCCAATGTCACTTGTACGCCTT 849
BSNT_05459___ 850 CTTCGTTATTCCAGCATCCTGATTACCATTTATTTGCCGGGCTTATATAT 899
|||||||||||||||||||||||.||||||||||||||.||..|.|||||
BSU35800___ge 850 CTTCGTTATTCCAGCATCCTGATCACCATTTATTTGCCCGGTCTGTATAT 899
BSNT_05459___ 900 TTCTCTCGTTTCCTTCCATACGGGGCTTTTGCCGACGAGAATGGCTATTT 949
||||||||||||.||.||.||.|||||.||||||||.||||||||.||||
BSU35800___ge 900 TTCTCTCGTTTCTTTTCACACCGGGCTATTGCCGACTAGAATGGCCATTT 949
BSNT_05459___ 950 CAATTGCAGGCAGCAGGCTGAATGTGCCCTTTCCGCCTTTTGTTGAAGCC 999
|.|||||||||||||||||.||.||.||.||.|||||||||||.||.|||
BSU35800___ge 950 CCATTGCAGGCAGCAGGCTTAACGTACCATTCCCGCCTTTTGTAGAGGCC 999
BSNT_05459___ 1000 TTTATTATGATATTTACGATAGAACTGATCCGGGAAGCCGGTTTACGGCT 1049
|||||.|||||.||||||||.|||.||||.||.||||||||.|||.||||
BSU35800___ge 1000 TTTATCATGATCTTTACGATCGAATTGATTCGAGAAGCCGGATTAAGGCT 1049
BSNT_05459___ 1050 GCCAAAGCCGATCGGACAGACGATTGGGCTTATTGGAGGCGTTGTCATCG 1099
|||.||||||||.||||||||.|||||.|||||.||.|||||||||||||
BSU35800___ge 1050 GCCTAAGCCGATTGGACAGACAATTGGCCTTATCGGCGGCGTTGTCATCG 1099
BSNT_05459___ 1100 GACAGGCAGCTGTGCAGGCGCAAATTGTCAGCGCACTGATGGTCATTGTC 1149
|||||||||||||.|||||||||||||||||.||.||.||||||||||||
BSU35800___ge 1100 GACAGGCAGCTGTTCAGGCGCAAATTGTCAGTGCGCTTATGGTCATTGTC 1149
BSNT_05459___ 1150 GTTTCCGTTACGGCATTGGCGTCCTTTACCGTTCCTTCATACGCCTTTAA 1199
|||||.||.||.|||.||||.|||||||||||||||||||||||||.|||
BSU35800___ge 1150 GTTTCTGTCACAGCACTGGCATCCTTTACCGTTCCTTCATACGCCTATAA 1199
BSNT_05459___ 1200 CTTTCCGCTGCGGATTATTCGTATCGCAGCAATGATAAGTGCAGCTGTAT 1249
|||||||||||||||.|||||.||||..|..||||||||||||.|.|...
BSU35800___ge 1200 CTTTCCGCTGCGGATCATTCGGATCGGGGTTATGATAAGTGCAACAGCGC 1249
BSNT_05459___ 1250 TGGGCATGTATGGCGTCATCATGGTCTTTCTGTTAGTAATTGGCCATTTA 1299
|.||||||||.|||||.||.|||||.|.||||||.||.||.||||||.|.
BSU35800___ge 1250 TTGGCATGTACGGCGTTATAATGGTTTATCTGTTTGTGATCGGCCATCTC 1299
BSNT_05459___ 1300 ATGCGTTTGAAAAGCTTTGGCCAGGATTACATTATTCCGATAATGGCACA 1349
|||||..||||||||||||||||||||||||||||.|||||.|||||.||
BSU35800___ge 1300 ATGCGCCTGAAAAGCTTTGGCCAGGATTACATTATCCCGATCATGGCGCA 1349
BSNT_05459___ 1350 GCCCGGACAAGATTTGAAAGACACGATTATTCGCGTTCCCACCCTATTTT 1399
|||.|||||.||||||||||||||..|.||.||..|||||||..|.||||
BSU35800___ge 1350 GCCTGGACAGGATTTGAAAGACACAGTCATCCGTATTCCCACGATGTTTT 1399
BSNT_05459___ 1400 TAAAAAGAAGACCTACCCGCAAAGGCACAAAAGATAAAATCAGACAAAGG 1449
|||||||||||||.||.||.||.|...|..|||||||.||||||||||||
BSU35800___ge 1400 TAAAAAGAAGACCGACACGAAACGATCCCGAAGATAACATCAGACAAAGG 1449
BSNT_05459___ 1450 TGA 1452
|||
BSU35800___ge 1450 TGA 1452
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.