Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05457 and BSU35790

See Amino acid alignment / Visit BSNT_05457 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:21
# Commandline: needle
#    -asequence dna-align/BSNT_05457___pmi.1.22522.seq
#    -bsequence dna-align/BSU35790___yvyI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05457___pmi-BSU35790___yvyI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05457___pmi-BSU35790___yvyI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05457___pmi
# 2: BSU35790___yvyI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 953
# Identity:     930/953 (97.6%)
# Similarity:   930/953 (97.6%)
# Gaps:           4/953 ( 0.4%)
# Score: 4534.0
# 
#
#=======================================

BSNT_05457___      1 ATGACGCAATCACCGATTTTTCTAACGCCTGTGTTTAAAGAAAAAATCTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv      1 ATGACGCAATCACCGATTTTTCTAACGCCTGTGTTTAAAGAAAAAATCTG     50

BSNT_05457___     51 GGGCGGAACCGCTTTACGAGATAGATTTGGATACAGTATTCCTTCAGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv     51 GGGCGGAACCGCTTTACGAGATAGATTTGGATACAGTATTCCTTCAGAAT    100

BSNT_05457___    101 CAACGGGGGAATGCTGGGCCATTTCCGCTCATCCAAAAGGACCGAGCACT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    101 CAACGGGGGAATGCTGGGCCATTTCCGCTCATCCAAAAGGACCGAGCACT    150

BSNT_05457___    151 GTTGCAAATGGCCCGTATAAAGGAAAGACATTGATCGAGCTTTGGGAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    151 GTTGCAAATGGCCCGTATAAAGGAAAGACATTGATCGAGCTTTGGGAAGA    200

BSNT_05457___    201 GCACCGTGAAGTATTCGGCGGTGTAGAGGGGGATCGGTTCCCGCTTCTGA    250
                     |||||||||||||||||||||.|||||||||||||||||.||||||||||
BSU35790___yv    201 GCACCGTGAAGTATTCGGCGGCGTAGAGGGGGATCGGTTTCCGCTTCTGA    250

BSNT_05457___    251 AAAAGCTGCTGGATGTGAAGGAAGGTACGTCAATTAAAGTTCACCCTGAT    300
                     .|||||||||||||||||||||||.|||||||||||||||||||||||||
BSU35790___yv    251 CAAAGCTGCTGGATGTGAAGGAAGATACGTCAATTAAAGTTCACCCTGAT    300

BSNT_05457___    301 GATTACTATGCCGGAGAAAACGAAGAGGGAGAACTCGGCAAGACGGAATG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    301 GATTACTATGCCGGAGAAAACGAAGAGGGAGAACTCGGCAAGACGGAATG    350

BSNT_05457___    351 CTGGTACATTATCGACTGTAAGGAAAACGCAGAAATCATTTACGGGCATA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    351 CTGGTACATTATCGACTGTAAGGAAAACGCAGAAATCATTTACGGGCATA    400

BSNT_05457___    401 CGGCCCGCTCAAAAACCGAACTTGTCACAATGATCAACAGCGGTGACTGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    401 CGGCCCGCTCAAAAACCGAACTTGTCACAATGATCAACAGCGGTGACTGG    450

BSNT_05457___    451 GAGGGCCTGCTGCGAAGAATCAAAATTAAACCGGGTGATTTCTATTATGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    451 GAGGGCCTGCTGCGAAGAATCAAAATTAAACCGGGTGATTTCTATTATGT    500

BSNT_05457___    501 GCCGAGCGGAACGCTGCATGCATTGTGCAAGGGGGCCCTTGTTTTAGAGA    550
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU35790___yv    501 GCCGAGCGGAACGCTGCACGCATTGTGCAAGGGGGCCCTTGTTTTAGAGA    550

BSNT_05457___    551 CTCAGCAAAATTCAGATGCCACATACCGGGTGTACGATTATGACCGGGTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||..||
BSU35790___yv    551 CTCAGCAAAATTCAGATGCCACATACCGGGTGTACGATTATGACCGTCTT    600

BSNT_05457___    601 GATGACAACGGGAAG-CCAAGAGAGCTTCATTTTGCCAAAGCGGTCAATG    649
                     |||..|||| ||||| ||.|||||||||||||||||||||||||||||||
BSU35790___yv    601 GATAGCAAC-GGAAGTCCGAGAGAGCTTCATTTTGCCAAAGCGGTCAATG    649

BSNT_05457___    650 CCGCCACGGTTCCCCATGTGGACGGGTATATTGATGAATCGACCGAATCA    699
                     |||||||||||||||||||||||||||||||.|||||||||||.||||||
BSU35790___yv    650 CCGCCACGGTTCCCCATGTGGACGGGTATATAGATGAATCGACAGAATCA    699

BSNT_05457___    700 AGAAAAGGAATAACCATTAAAACGTTTGTCCAAGGGGAATATTTTTCGGT    749
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU35790___yv    700 AGAAAAGGAATAACCATTAAAACATTTGTCCAAGGGGAATATTTTTCGGT    749

BSNT_05457___    750 GTATAAATGGGACATCAATGGCGAAGCTGAAATGGCTCAGGATGAATCCT    799
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    750 TTATAAATGGGACATCAATGGCGAAGCTGAAATGGCTCAGGATGAATCCT    799

BSNT_05457___    800 TTCTGATTTGCAGCGTGATAGAAGGAAGCGGTTTGCTGATGTATGAGAGA    849
                     |||||||||||||||||||||||||||||||||||||.|.||||||| ||
BSU35790___yv    800 TTCTGATTTGCAGCGTGATAGAAGGAAGCGGTTTGCTCAAGTATGAG-GA    848

BSNT_05457___    850 -GAAACATGTCCGCTCAAAAAAGGCGATCACTTTATTATGCCGGCTCAAA    898
                      .||||||||||||||||||||||.||||||||||||.||||||||||||
BSU35790___yv    849 CAAAACATGTCCGCTCAAAAAAGGTGATCACTTTATTTTGCCGGCTCAAA    898

BSNT_05457___    899 TGCCCGATTTTACGATAAAAGGAACTTGTACCCTTATCGTGTCTCATATT    948
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35790___yv    899 TGCCCGATTTTACGATAAAAGGAACTTGTACCCTTATCGTGTCTCATATT    948

BSNT_05457___    949 TAA    951
                     |||
BSU35790___yv    949 TAA    951


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