Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05456 and BSU35780

See Amino acid alignment / Visit BSNT_05456 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:21
# Commandline: needle
#    -asequence dna-align/BSNT_05456___lytD.1.22522.seq
#    -bsequence dna-align/BSU35780___lytD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05456___lytD-BSU35780___lytD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05456___lytD-BSU35780___lytD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05456___lytD
# 2: BSU35780___lytD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2643
# Identity:    2587/2643 (97.9%)
# Similarity:  2587/2643 (97.9%)
# Gaps:           0/2643 ( 0.0%)
# Score: 12711.0
# 
#
#=======================================

BSNT_05456___      1 ATGAAAAAGAGACTAATCGCACCTATGCTTCTATCCGCCGCGTCCCTTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly      1 ATGAAAAAGAGACTAATCGCACCTATGCTTCTATCCGCCGCGTCCCTTGC     50

BSNT_05456___     51 CTTTTTTGCCATATCTGGTTCTGCCCAGGCAGCCGCGTATACCGACTACT    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU35780___ly     51 CTTTTTTGCCATGTCTGGTTCTGCCCAGGCAGCCGCGTATACCGACTACT    100

BSNT_05456___    101 CACTATATCAAGTAGAGCCGTCGAATACGTTCAGTACAGAAAGCCAAGCC    150
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    101 CACTATATAAAGTAGAGCCGTCGAATACGTTCAGTACAGAAAGCCAAGCC    150

BSNT_05456___    151 TCACAAGCTGTCGCCAAACTGGAAAAAGATACTGGCTGGGATGCATCCTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    151 TCACAAGCTGTCGCCAAACTGGAAAAAGATACTGGCTGGGATGCATCCTA    200

BSNT_05456___    201 TCAGGCTTCAGGCACAACAACGACCTACCAAATTTCCGCCTCAGGCATTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    201 TCAGGCTTCAGGCACAACAACGACCTACCAAATTTCCGCCTCAGGCATTC    250

BSNT_05456___    251 ATAGCGAATCAGAAGCGAAAGCAATACTGAGCGGACTCGCCAAACAGACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    251 ATAGCGAATCAGAAGCGAAAGCAATACTGAGCGGACTCGCCAAACAGACA    300

BSNT_05456___    301 TCGATTACAGGAACGTCAAGTCCTGTTGGAAGCAAACAGCCATATGTCAC    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    301 TCAATTACAGGAACGTCAAGTCCTGTTGGAAGCAAACAGCCATATGTCAC    350

BSNT_05456___    351 CATCTCGTCAGGTGCCATCTCCGGAGAAAAACAGGCCAACACTGTCCTAG    400
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU35780___ly    351 CATCTCGTCAGGTGCCATCTCCGGAGAAAAACAGGCCAACACTATCCTAG    400

BSNT_05456___    401 CAAAGCTGAAACAGGAGACGGGAGTGGCTGGCGCTGTAAAAGCTTACGGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    401 CAAAGCTGAAACAGGAGACGGGAGTGGCTGGCGCTGTAAAAGCTTACGGA    450

BSNT_05456___    451 GCAGCTCAGCCCTATATGAACGTCATGACATCAGACATTGCTGATGAGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    451 GCAGCTCAGCCCTATATGAACGTCATGACATCAGACATTGCTGATGAGAC    500

BSNT_05456___    501 AAAAGTCAAGGCGCTTATCCAGAACCTGGCCAAGCAAACGGGGATTAAAA    550
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU35780___ly    501 AAAAGTCAAGGCGCTTATCCAGAGCCTGGCCAAGCAAACGGGGATTAAAA    550

BSNT_05456___    551 GCTCGTATCAGCCCATCACACACACGGTGTCTGTCACAACCATTCGTTCT    600
                     |||||||||||||||||||||||||||||||||||||||||||||..|||
BSU35780___ly    551 GCTCGTATCAGCCCATCACACACACGGTGTCTGTCACAACCATTCAGTCT    600

BSNT_05456___    601 GGCACAATCGTGGGAGACAGCAGAGCAGCGCAGATCAAAAAAGCCTTCCA    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU35780___ly    601 GGCACAATCGTGGGAGACAGCAGAGCAGCGCAGATCAAAAACGCCTTCCA    650

BSNT_05456___    651 AAAGGAATCGGGGCTGAAGGCATCATTAAAGGAAACAGTGAAAGGACAAG    700
                     |||||||||.||||||.||||||||||||||||||||||||||||.||||
BSU35780___ly    651 AAAGGAATCTGGGCTGCAGGCATCATTAAAGGAAACAGTGAAAGGGCAAG    700

BSNT_05456___    701 CCTATTATACGTTCACAACTGCTGCCATTTCAGGTGAAGCGAATGCCAAG    750
                     ||||||||||||||||||||||.|||||||||||||||||.||||||||.
BSU35780___ly    701 CCTATTATACGTTCACAACTGCCGCCATTTCAGGTGAAGCCAATGCCAAA    750

BSNT_05456___    751 ACTCTATTGCAGCAGCTGAAACAGAGCACTGGCATCACAGGCAGCTACAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    751 ACTCTATTGCAGCAGCTGAAACAGAGCACTGGCATCACAGGCAGCTACAA    800

BSNT_05456___    801 GTCCATCAATCAAAAAACAACCGTTGAGTCATACAATGTCCAATCAGCTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    801 GTCCATCAATCAAAAAACAACCGTTGAGTCATACAATGTCCAATCAGCTT    850

BSNT_05456___    851 ATTTCAAAGGCCTGAATACAGTAAAGGACGCCATCAGCCAGATCAAGAAA    900
                     ||||||||||.||||.||||||||||||||||||||||||.|||||||||
BSU35780___ly    851 ATTTCAAAGGGCTGAGTACAGTAAAGGACGCCATCAGCCAAATCAAGAAA    900

BSNT_05456___    901 AACACCGGTGTATCCGGCAGTTATCAACAGGTTGGAAAAAGCACATCATA    950
                     |||||.||.|||||||||||||||||||||||||||||||||||||||||
BSU35780___ly    901 AACACTGGCGTATCCGGCAGTTATCAACAGGTTGGAAAAAGCACATCATA    950

BSNT_05456___    951 TACCGTGAATATGAAGGGGATAACAAAACAGCAGCTCCAAAAAGTAGATA   1000
                     ||||||||||||||||||.||||||||||||||||||||||||.||||.|
BSU35780___ly    951 TACCGTGAATATGAAGGGTATAACAAAACAGCAGCTCCAAAAAATAGACA   1000

BSNT_05456___   1001 CTTTCTTTAAAAAGAAAAAATGGCATTATACGTCATCCAGCGTCAAAAAA   1050
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU35780___ly   1001 CTTTCTTTAAAAAGAAAAAATGGCATTACACGTCATCCAGCGTCAAAAAA   1050

BSNT_05456___   1051 ACAACAACGTCTGCGGCTTACCAAATCACGACAGCCAAGATGTTAGGCGA   1100
                     ||.|||||||||||.|||||.|||||||||||.||.|||||.||||||||
BSU35780___ly   1051 ACGACAACGTCTGCAGCTTATCAAATCACGACGGCAAAGATTTTAGGCGA   1100

BSNT_05456___   1101 GCAGCAAGCAAACAAAGCAGCAGCCTTCTTTGCTCAGAAAAAAGTAAAAG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1101 GCAGCAAGCAAACAAAGCAGCAGCCTTCTTTGCTCAGAAAAAAGTAAAAG   1150

BSNT_05456___   1151 CCACAAAAACAGCAGCTGGATCAACAGCAGAAAATCAATATCAGCTCATC   1200
                     |..|||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1151 CTGCAAAAACAGCAGCTGGATCAACAGCAGAAAATCAATATCAGCTCATC   1200

BSNT_05456___   1201 TCAGAAGAAACATCAGATCAAGCAAAAGTCACAAAGGGTTTGAACATATT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1201 TCAGAAGAAACATCAGATCAAGCAAAAGTCACAAAGGGTTTGAACATATT   1250

BSNT_05456___   1251 AAAGAAAAATCAGCTGAGTGCTTCTGCGAAATCCGTCAAAAAACAAATAG   1300
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU35780___ly   1251 AAAGAAAAATCAGCTAAGTGCTTCTGCGAAATCCGTCAAAAAACAAATAG   1300

BSNT_05456___   1301 CTGACACGTTTAAAATCACAACCGAATCTCTGTTTGACCAAACGAAAGTC   1350
                     ||||||||||||||||||||||||||||||||.||||.||||||||||||
BSU35780___ly   1301 CTGACACGTTTAAAATCACAACCGAATCTCTGCTTGATCAAACGAAAGTC   1350

BSNT_05456___   1351 AATCAGGCACTCACGTTTTTCAAATCGAATCATATATCAGCAGCAAGCCA   1400
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU35780___ly   1351 AATCAGGCACTCACGTTTTTCAAATCGAATCATATATCAGTAGCAAGCCA   1400

BSNT_05456___   1401 GAAAACCGGTCAGACAGCTGCGAGCAGCTATCAAATCACAACTGAAGCTA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1401 GAAAACCGGTCAGACAGCTGCGAGCAGCTATCAAATCACAACTGAAGCTA   1450

BSNT_05456___   1451 TCATCAGCCAAGAAGAGATTGACCGCGTTTTAACATTTTTCAAACAAAAT   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1451 TCATCAGCCAAGAAGAGATTGACCGCGTTTTAACATTTTTCAAACAAAAT   1500

BSNT_05456___   1501 CATATCGCAGTCACAACATCAAAAACAGGCCAGACAGCATATACACAATA   1550
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU35780___ly   1501 CATATCGCAGTCACAACATCAAAAACAGGCCAGACTGCATATACACAATA   1550

BSNT_05456___   1551 CAAAATCGTGACAACACAGCTCAGCAGCAAAACAGCATTGAATAATGGGT   1600
                     |||||||||||||||||||||.|||||||||||.||||||||.|||||||
BSU35780___ly   1551 CAAAATCGTGACAACACAGCTTAGCAGCAAAACCGCATTGAACAATGGGT   1600

BSNT_05456___   1601 TAACCTATCTTAAATCGAAAAGTGTAACCCCTAGCTATACAACGAAAAGC   1650
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU35780___ly   1601 TAACCTATCTTAAATCGAAAAGTGTAACCCCGAGCTATACAACGAAAAGC   1650

BSNT_05456___   1651 AATACGCTTTATAAAATCAGCGTAAATGAGCAGTTCACAGGCAATGATAC   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1651 AATACGCTTTATAAAATCAGCGTAAATGAGCAGTTCACAGGCAATGATAC   1700

BSNT_05456___   1701 AGCTGCTGCGGCATCAACGAAGCTAAAACAATTATACGGATGGACATCAT   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1701 AGCTGCTGCGGCATCAACGAAGCTAAAACAATTATACGGATGGACATCAT   1750

BSNT_05456___   1751 CTATCGTGAAGATCAAAAACGGTCCGCAAATCATGAAAACAAATTACAAT   1800
                     ||||||||||||||||||||||.||||||||||||||||||||.||||||
BSU35780___ly   1751 CTATCGTGAAGATCAAAAACGGCCCGCAAATCATGAAAACAAACTACAAT   1800

BSNT_05456___   1801 CTCTCGCTTCGTGATATGGTCCAAAAACAAATGACAGTAAGTCCGCAAAC   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1801 CTCTCGCTTCGTGATATGGTCCAAAAACAAATGACAGTAAGTCCGCAAAC   1850

BSNT_05456___   1851 AGACGGAGCGGCTTACGTATCGCTCACGTACATTAATACAGCAACATCAA   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   1851 AGACGGAGCGGCTTACGTATCGCTCACGTACATTAATACAGCAACATCAA   1900

BSNT_05456___   1901 CCGTTACGGCTGACGTACTAAATATCCGGTCAACGCCGGAAGTCAGCCCG   1950
                     |.|||||||||||.||||||||||||||||||||||||||||||||||||
BSU35780___ly   1901 CTGTTACGGCTGATGTACTAAATATCCGGTCAACGCCGGAAGTCAGCCCG   1950

BSNT_05456___   1951 ACAAACGTGATCGGCCAATTTAAAAAAGGCGATAAAGTGAAAATCATCGG   2000
                     |||||||||||||||||.||||||||||||||||||||||||.|||||||
BSU35780___ly   1951 ACAAACGTGATCGGCCAGTTTAAAAAAGGCGATAAAGTGAAAGTCATCGG   2000

BSNT_05456___   2001 ACAGATAAACGGCTGGGCTAAGATCAATTTGGGCTGGCGAAACGCAAGCA   2050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2001 ACAGATAAACGGCTGGGCTAAGATCAATTTGGGCTGGCGAAACGCAAGCA   2050

BSNT_05456___   2051 GTGATGAAGTAGTTCAATACGTGGATCCAAATAACTTTACCAGAGACAGC   2100
                     ||||||||||||||||||||||||||||.|||||||||.|||||||||||
BSU35780___ly   2051 GTGATGAAGTAGTTCAATACGTGGATCCGAATAACTTTTCCAGAGACAGC   2100

BSNT_05456___   2101 AAATACTACTTCCAATTTCTCAAGCTGTCACAGACAGCGGGCCTCAGCGT   2150
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU35780___ly   2101 AAATACTACTTCCAATTTCTCAAGCTGTCACAGACAGCGGGTCTCAGCGT   2150

BSNT_05456___   2151 TACTGAGGTCAATCAGAAAGTGCTTGCGGGTAAAGGCATCCTGACAGGGA   2200
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2151 TACTGAGGTAAATCAGAAAGTGCTTGCGGGTAAAGGCATCCTGACAGGGA   2200

BSNT_05456___   2201 GAGCAAAGGCATTTATCGATGCCGCCAATCAATATAGCATCAACGAACTG   2250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2201 GAGCAAAGGCATTTATCGATGCCGCCAATCAATATAGCATCAACGAACTG   2250

BSNT_05456___   2251 TATTTAATCTCACACGCTCTTCTGGAAACAGGAAACGGGACATCCGCCTT   2300
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU35780___ly   2251 TATTTAATCTCACACGCTCTTCTGGAAACAGGAAACGGGACATCCGCTTT   2300

BSNT_05456___   2301 AGCCAATGGATTAACCTATAACGGAAAAAAAGTATACAACATGTATGGAA   2350
                     |||||||||||||||||||||||||||||..|||||||||||||||||||
BSU35780___ly   2301 AGCCAATGGATTAACCTATAACGGAAAAACCGTATACAACATGTATGGAA   2350

BSNT_05456___   2351 TTGGAGCATACGACAGCAATCCGAATTACTACGGAGCCAAATATGCGTAC   2400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2351 TTGGAGCATACGACAGCAATCCGAATTACTACGGAGCCAAATATGCGTAC   2400

BSNT_05456___   2401 GAGCAGGGCTGGTTCACACCAGAAGCGGCCATTATCGGCGGAGCTAAATT   2450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2401 GAGCAGGGCTGGTTCACACCAGAAGCGGCCATTATCGGCGGAGCTAAATT   2450

BSNT_05456___   2451 CATAGGCTCATCGTATATCCACAACACAGCTTACAATCAGGACACACTGT   2500
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35780___ly   2451 CATAGGCTCATCGTATATCCACAACACAGCTTACAATCAAGACACACTGT   2500

BSNT_05456___   2501 ACAAAATGAGATGGTCAGCTACAGCGACACATCAATACGCAACAGACATC   2550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2501 ACAAAATGAGATGGTCAGCTACAGCGACACATCAATACGCAACAGACATC   2550

BSNT_05456___   2551 GGCTGGGCGTACAAACAAGTAAACCGCATGTACAGCCTGTATTCATTGCT   2600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35780___ly   2551 GGCTGGGCGTACAAACAAGTAAACCGCATGTACAGCCTGTATTCATTGCT   2600

BSNT_05456___   2601 GGACGGCTATACACTTTACTTTGATGTTCCGGAATATCGATAA   2643
                     ||||||.|||||||||||.||||||||||||||||||||||||
BSU35780___ly   2601 GGACGGTTATACACTTTATTTTGATGTTCCGGAATATCGATAA   2643


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