Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05455 and BSU35760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_05455___tagB.1.22522.seq
# -bsequence dna-align/BSU35760___tagB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05455___tagB-BSU35760___tagB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05455___tagB-BSU35760___tagB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05455___tagB
# 2: BSU35760___tagB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1299
# Identity: 725/1299 (55.8%)
# Similarity: 725/1299 (55.8%)
# Gaps: 288/1299 (22.2%)
# Score: 1738.5
#
#
#=======================================
BSNT_05455___ 1 ATGAATATACGTTC------------TT--TATTGGTTATGATTTACTCG 36
|||||.|||.|.|| || ||||.| |||..|||| ||.
BSU35760___ta 1 ATGAAAATAAGATCACTACTGGCGAATTGCTATTTG-TATTTTTTA-TCA 48
BSNT_05455___ 37 GCCGGTCTCGCTTTGACCGGTTTTATTTTCAG--AAGGGTAAAAGCTCGC 84
|| ..||||.|| |||||.| |.||||.|||.||
BSU35760___ta 49 GC---AATCGCCTT-----------TTTTCTGCAATGGGTGAAACCT--- 81
BSNT_05455___ 85 GATAG---AGCTGTATTGCTTG--CTTCCT-------TTC--------CG 114
||.|| || || |.|||| ||| ||
BSU35760___ta 82 GAAAGCAAAG----------TGACCCTCCTGATCTCATTCGAAGCAAACG 121
BSNT_05455___ 115 GATAATGCGCGCGAGCTGCTTGATGAGTATGTCAGCAGCA--------AC 156
.|.|| |||| |.|||||.||.|||| |.|| ||
BSU35760___ta 122 CAAAA-----GCGA--TTCTTGAGGAATATG-----AACAAGGACAATAC 159
BSNT_05455___ 157 TGGCCGTTTGAAATGGAAGTCCT-TTTAACAAGGCACGCC---------- 195
| |.|.|.||.|..|..|||| |.||.|.| |||.|||
BSU35760___ta 160 T---CTTATAAACTTAACATCCTGTATACCCA-GCAGGCCTCTGCTATTG 205
BSNT_05455___ 196 ------GTTTCCC--TTGCAGATGAATATCCTTCTGTTCGATCGCAAATA 237
|.||||| .||.|||||.|||| || ||..|||
BSU35760___ta 206 CCGAGAGCTTCCCGAATGTAGATGCATAT-------TT--ATTACAA--- 243
BSNT_05455___ 238 ATCAACGAGAAAAATCCGATTCATCTCATTAAAGCCGTATACCTGATGTT 287
||.|||||.||.||.||||||||||||||.||||||||.|||||
BSU35760___ta 244 ------GAAAAAAACCCTATCCATCTCATTAAAGCTGTATACCTAATGTT 287
BSNT_05455___ 288 TAGGTGTAAATTTGTGTTAACGGATAATTATTTTCTGCTGACAAGTGTTT 337
||...|||||.|..|..||||.||||||||.|||||..|.||||||||.|
BSU35760___ta 288 TAACAGTAAAGTGATCATAACAGATAATTACTTTCTATTAACAAGTGTGT 337
BSNT_05455___ 338 TGAATAAACGTCCTCAGACGACATGCATTCAAATTTGGCATGCGTCCGGC 387
|.|||||.||....||.||||.|||.||.|||.|.|||||.||....|||
BSU35760___ta 338 TAAATAAGCGGAAGCAAACGAAATGTATCCAAGTATGGCACGCAAATGGC 387
BSNT_05455___ 388 GCTTTGAAGAAGTTTGGACTCGAGGATATCGGAAACCGCTATCGATCCAC 437
.|..|.||.||.|||||..|.||.||.||...|||| ||.||.
BSU35760___ta 388 TCACTCAAAAAATTTGGTTTGGAAGACATTACAAAC--------ATGCAA 429
BSNT_05455___ 438 CGG--------GGATATCAAACGGTTTAAAAAGGTGTATCGTTCGTTTGA 479
||| .|||||.|||.||||..||||.||.||..||||||.|||
BSU35760___ta 430 CGGACGAAAACTGATATTAAAAGGTTCCAAAAAGTATACAGTTCGTATGA 479
BSNT_05455___ 480 TCATATCGTTGTCGGCTCTGAAAAAATGGTGGACATTTTCAAGCGGTCAT 529
|.||.|...|||.|||||.|||.|.||||...|.||.||||||...||||
BSU35760___ta 480 TTATTTAACTGTTGGCTCAGAAGAGATGGCAAATATCTTCAAGAAATCAT 529
BSNT_05455___ 530 TCGGAGTGAAAGATGACCGTTTTTTGCGGACGGGTGTTCCGTTAACTGA- 578
|.|||.|.||.|||.|||..||.||....|..|||||.||.|||||.||
BSU35760___ta 530 TTGGAATAAAGGATAACCAATTATTAAAAATAGGTGTACCTTTAACAGAC 579
BSNT_05455___ 579 --TGAATACTTTCATGTCAA-AAGAAAAA-----CAG-----CTGACCGT 615
|.|.||| |..|..|| |||||||| ||| ||.|.|.|
BSU35760___ta 580 CCTTATTAC---CGAGAAAACAAGAAAAAAATTTCAGATACTCTAAACAT 626
BSNT_05455___ 616 CC---GAACCAAAAGCTTATTCTGTATGCGCCGACATACAGGGACTATTG 662
.| ||| ||||..|.||.||.|||||.|||||.|..||.||.|||..
BSU35760___ta 627 ACAAAGAA--AAAAAATAATCCTCTATGCACCGACGTTTAGAGATTATAA 674
BSNT_05455___ 663 TTTGACGTCCATTCGTCTCCCTTTCTCTAAGGAGCAGCTCTCCAG-AGAA 711
|.||...||.||||...|.||||| |.||| ||||
BSU35760___ta 675 TATGCAATCAATTCAATTGCCTTT----------------TACAGAAGAA 708
BSNT_05455___ 712 C---------------TGAAGGGAGAATTTTTGCTACTGGTCAAACTACA 746
| |.||.|.|||||.|.|..||.|.||.||.||.||
BSU35760___ta 709 CAATTAATTCATCAGTTAAAAGAAGAATATGTTTTATTTGTTAAGCTGCA 758
BSNT_05455___ 747 TCCAGCCGTGCGGAAACAGATTACTTTTGAAGAACACGAAGGG--TTGAT 794
|||.|||.|.|.|||..|.|||..|.||.||.|...| ||.| |..||
BSU35760___ta 759 TCCCGCCATTCAGAACAATATTGATATTAAATATTCC--AGTGATTATAT 806
BSNT_05455___ 795 CAAAGACGTATCAGACGTTCCGTTAAAGAATTTG-----CTGATGG---- 835
.|||||.||.||..||..|.|.|| .|||| ||.||||
BSU35760___ta 807 TAAAGATGTTTCTAACTATGCCTT-----GTTTGATCTACTCATGGCTGC 851
BSNT_05455___ 836 AAAGTGACATCCTGATTTCCGACTACTCGTCAGTCGCCTTTGA--GTACG 883
| |||||..|.||..|.|||||.||.||.||..||||||| .|.||
BSU35760___ta 852 A----GACATATTAATCACTGACTATTCTTCTGTTCCCTTTGAATTTTCG 897
BSNT_05455___ 884 CTTTGTTAAATAAACCGATTTTGTTTTTCACGTATGATATGGCAGAGTAT 933
.|| |||||||||||.|||.|.||||..||.||.|||.|...|...|||
BSU35760___ta 898 ATT--TTAAATAAACCCATTCTTTTTTATACTTACGATTTAAAACTTTAT 945
BSNT_05455___ 934 AATGAAAAACGCGGACTGATCGATGAT----TTTGAAGCAGTCATCCCCG 979
.|..|.||.||.|||.||.|.|||.|| ||| |..|.||.||.|
BSU35760___ta 946 CAACAGAAGCGGGGATTGGTTGATAATTATCTTT----CCATAATACCTG 991
BSNT_05455___ 980 GCAGAGCCTGC-ATGGACACCGAA--ATGCTGTTGAAAGAAA-TCAAA-- 1023
|.||||||||| || ||||..||| || |..|.||.|||| |||||
BSU35760___ta 992 GAAGAGCCTGCTAT-GACAGTGAATCAT--TAATAAATGAAATTCAAACC 1038
BSNT_05455___ 1024 -----GAAATGTCCGATACAAAGGAAAACTTCAAGAGGTTTGCGAAAGAG 1068
.||.|.| |.||||..||||.|| .|||.|||.|||
BSU35760___ta 1039 CCATTTAATTAT----TCCAAAATAAAAGTT------TTTTCCGATAGA- 1077
BSNT_05455___ 1069 TGGCATCAATATTCAACAGGTGATGCCAGCATGC--GCCTGTTGAACTTT 1116
|||.||.|.||||| ||||| .|.||.| ||| .||.|||
BSU35760___ta 1078 TGGAATAAGTATTC------TGATG--GGAATTCAAGCC----AAAATTT 1115
BSNT_05455___ 1117 A-TGAGCGAGCATATGACAGAAAATGAAAAAAGACCGGCCGGTTCCTAA 1164
| ||| ||.|.|..||||||..||.||| ||||
BSU35760___ta 1116 ATTGA------ATTTCATCGAAAATTTAATAAG------------CTAA 1146
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