Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05449 and BSU35710

See Amino acid alignment / Visit BSNT_05449 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence dna-align/BSNT_05449___tagG.1.22522.seq
#    -bsequence dna-align/BSU35710___tagG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05449___tagG-BSU35710___tagG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05449___tagG-BSU35710___tagG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05449___tagG
# 2: BSU35710___tagG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 842
# Identity:     628/842 (74.6%)
# Similarity:   628/842 (74.6%)
# Gaps:          28/842 ( 3.3%)
# Score: 2287.0
# 
#
#=======================================

BSNT_05449___      1 ATGAATGCATTAG-TGAGAATACTGAAAGAGCAAGCAACGTCATTTTCTT     49
                     ||||||| |||.| ||.|.|||||.|.|||||||..||||||||||.|||
BSU35710___ta      1 ATGAATG-ATTTGTTGCGTATACTCAGAGAGCAAATAACGTCATTTCCTT     49

BSNT_05449___     50 TAATATTACGCTTGGCAGCTTACGAAACAAAATCAAAATACCAAATGAAC     99
                     ||||.|||.|.|||||.|||||.|||||.||.||.|||||.||||||||.
BSU35710___ta     50 TAATTTTAAGATTGGCGGCTTATGAAACCAAGTCTAAATATCAAATGAAT     99

BSNT_05449___    100 TATTTGGGTGTGCTGTGGCAGTTGTTAAATCCACTCATTCAAATGTTGGC    149
                     |||||.|||||..|.||||||||.||||||||.||.||.||||||.||||
BSU35710___ta    100 TATTTAGGTGTCTTATGGCAGTTCTTAAATCCGCTTATCCAAATGCTGGC    149

BSNT_05449___    150 CTACTGGTTTGTTTTTGGGATCGGGATTAGAAAAAGCACTGATGTGGTTA    199
                     |||||||||.||.|||||.||.|||||||||||..||..|..||||...|
BSU35710___ta    150 CTACTGGTTCGTATTTGGTATGGGGATTAGAAAGGGCGGTCCTGTGACAA    199

BSNT_05449___    200 CGGGTATTGGTGAAGTGTCTTTTATCATTTGGATGCTAGCCGGTTTGATT    249
                     |.||....||.||||||.|||||||.|||||||||||.||.||.||.||.
BSU35710___ta    200 CCGGAGCGGGCGAAGTGCCTTTTATTATTTGGATGCTGGCAGGATTAATC    249

BSNT_05449___    250 CCGTGGTTTTTTATCAGCCCGACGATTCTAGATGGTTCAAACAGTGTATA    299
                     ||.||||||||.|||||.||.||.||.||.|||||.|||||.|||||||.
BSU35710___ta    250 CCATGGTTTTTCATCAGTCCAACTATACTTGATGGATCAAATAGTGTATT    299

BSNT_05449___    300 TAAGCGAATCAACATGGTGGCCAAAATGAATTTTCCAATTAGCTCGCTTC    349
                     ||||||.||.||.||||||||.||||||||.||.||.|||||.||.||.|
BSU35710___ta    300 TAAGCGCATTAATATGGTGGCTAAAATGAACTTCCCGATTAGTTCTCTAC    349

BSNT_05449___    350 CTTCAGTAGCGATTGTGGCAAACCTGTTCAGCTATTTTGTGATGATGGTG    399
                     |.||.||.||.||||...|.|||.|.||.||.|||.|..|.|||||||||
BSU35710___ta    350 CGTCCGTGGCAATTGCATCTAACTTATTTAGTTATATGATCATGATGGTG    399

BSNT_05449___    400 ATTTATATCGTTGCA-------TTAACAGCGTCTGGTATTTATCCAAGTC    442
                     |||||||||.|||.|       ||||       ||||.|.|..||.|||.
BSU35710___ta    400 ATTTATATCATTGTACTCCTAGTTAA-------TGGTGTGTTCCCGAGTG    442

BSNT_05449___    443 TTCATTGGATTGAATACATTTACTATTTTATCTGTATGGTTATATTTATG    492
                     |.||||||.|..||||.|||||.||.||.|||||||||.||...||||||
BSU35710___ta    443 TGCATTGGTTACAATATATTTATTACTTCATCTGTATGATTGCTTTTATG    492

BSNT_05449___    493 TTTGCCTTTAGTTTGTTTAATTCAACCATTAGTGTGCTTGTTAGGGACTA    542
                     |||.|.||||||||||||||.|||||.||.||||||||..||||.||.||
BSU35710___ta    493 TTTTCGTTTAGTTTGTTTAACTCAACGATCAGTGTGCTGATTAGAGATTA    542

BSNT_05449___    543 TCAGTTTTTGCTCCAATCTGTGACAAGGCTGCTGTTTTTTTTGTTGCCTA    592
                     |||.||||||||.||..|.||.|||||.||..|||||||.||||||||.|
BSU35710___ta    543 TCAATTTTTGCTGCAGGCCGTAACAAGACTTTTGTTTTTCTTGTTGCCAA    592

BSNT_05449___    593 TCTTTTGGGAT----ATAGGACA-TCAGTTAGGGAAAGAGCATCCCGTTT    637
                     |.|||||||||    ||..||.| ||.||    .|||| .||.||||..|
BSU35710___ta    593 TTTTTTGGGATGTTAATGCGAAACTCGGT----CAAAG-CCACCCCGAAT    637

BSNT_05449___    638 TACTAACAGCTATTAAACTGAATCCACTTTTTTATATTTTAGATGGATTT    687
                     ||.|..|.|.|.|.||..||||||||||.||.||||||.|.||.|||||.
BSU35710___ta    638 TAGTGCCTGTTCTGAAGTTGAATCCACTATTCTATATTATTGAAGGATTC    687

BSNT_05449___    688 AGAAGCAGCTTTTTCGACGGAAGC-TGGTTCTTCGAAGATATAACATACA    736
                     .|.|.||||||.||.||.|| ||| |||||.|||.|.||.||.|..||||
BSU35710___ta    688 CGGAACAGCTTCTTAGATGG-AGCATGGTTTTTCCATGACATGAAGTACA    736

BSNT_05449___    737 CGTTGTATTTCTGGGCTTTCACATTATTGCTCTTGACTGTAGGATCTGTC    786
                     ||.||||.||.|||...||||||||..|..|.|||...|||||.|||.||
BSU35710___ta    737 CGCTGTACTTTTGGTTGTTCACATTCCTTTTATTGTTAGTAGGTTCTATC    786

BSNT_05449___    787 CTGCATATGAAATTCAGGGATAGGTTTGTTGACTTTCTTTAA    828
                     |||||||||||||||||.||.|.|||||||||||||||||||
BSU35710___ta    787 CTGCATATGAAATTCAGAGACAAGTTTGTTGACTTTCTTTAA    828


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05449 and BSU35710

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
