Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05429 and BSU35640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_05429.1.22522.seq
# -bsequence dna-align/BSU35640___lytA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05429-BSU35640___lytA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05429-BSU35640___lytA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05429
# 2: BSU35640___lytA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 419
# Identity: 196/419 (46.8%)
# Similarity: 196/419 (46.8%)
# Gaps: 172/419 (41.1%)
# Score: 423.0
#
#
#=======================================
BSNT_05429 1 TTGGAATTTGTCGATAAAAAGGGAGAGGTGAAGAAGATGAAAAAACTCAT 50
|||||||||.|.||
BSU35640___ly 1 ------------------------------------ATGAAAAAATTTAT 14
BSNT_05429 51 --------AGTTCTGACATTATCAATGCTGCTTTTGTTGTCAGCTTGCGG 92
.||||| |||| |.||||.||| ||.|.|||||
BSU35640___ly 15 TGCTTTACTGTTCT----TTAT-ATTGCTTCTT------TCGGGTTGCG- 52
BSNT_05429 93 CACTTCGGGCCAATCG------GAGGACAA-GTTAAGCT-------CAGG 128
|||..|||.| || |.||| ||.|||.| |||.
BSU35640___ly 53 ------GGGTTAATAGTCAAAAGA-GTCAAGGTGAAGATGTATCGCCAGA 95
BSNT_05429 129 CAATAAAAATGCAGCATCTGAAGAAACCATCACTAAAGAAGGTTCATTCG 178
||.||| ||| |||| ||.|||||||||.|.|..|
BSU35640___ly 96 CAGTAA--------CAT-TGAA---------ACAAAAGAAGGTACTTATG 127
BSNT_05429 179 CGGGGTTGGCTGACAGCCATACAATTGCGGTGAACA-TCGATGGCAAAGA 227
..|||||.|||||.|..||||||||.|..|| |||| |.||| ||.||
BSU35640___ly 128 TAGGGTTAGCTGATACTCATACAATAGAAGT-AACAGTAGAT---AATGA 173
BSNT_05429 228 AAC---AACGCTTCAAAT---TGATGAA---------GATCTT------- 255
..| .|..|||.|.|| |||.||| ||||||
BSU35640___ly 174 GCCGGTTAGTCTTGATATCACTGAAGAATCGACAAGTGATCTTGATAAGT 223
BSNT_05429 256 ----CAG----GAAAAAGTCA--ATTCCAT-TGAAGAGGGCAAAAAAGTC 294
||| ||.||.|||| |||.||| |||| |||||.|..
BSU35640___ly 224 TTAACAGTGGAGATAAGGTCACGATTACATATGAA------AAAAATGAT 267
BSNT_05429 295 GAAGTCCAATATACAAAAGTCGAGAATGGCGTCTTGGAGCTG--AAAAG- 341
||.| ||| || ||| ||| |||||
BSU35640___ly 268 GAGG--------------GTC-AG--------CTT----CTGTTAAAAGA 290
BSNT_05429 342 CATCGAA---ATCAAATAA 357
.||.||| ..|||.|||
BSU35640___ly 291 TATTGAACGTGCCAACTAA 309
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