Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05421 and BSU35600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_05421___tuaB.1.22522.seq
# -bsequence dna-align/BSU35600___tuaB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05421___tuaB-BSU35600___tuaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05421___tuaB-BSU35600___tuaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05421___tuaB
# 2: BSU35600___tuaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1558
# Identity: 1005/1558 (64.5%)
# Similarity: 1005/1558 (64.5%)
# Gaps: 224/1558 (14.4%)
# Score: 3141.0
#
#
#=======================================
BSNT_05421___ 1 ATGTCTACCATTACGAAACAAATATTAAGCGGTGCAAAATGGACAAGTGT 50
|||.|.|..|||||.||||||||..|.|||||||||||.|||||||||.|
BSU35600___tu 1 ATGCCAAGTATTACAAAACAAATCATGAGCGGTGCAAAGTGGACAAGTAT 50
BSNT_05421___ 51 TTCAACCTTGATCGTCACGGTTATTCAAATTATACAGTTTGCACTGCTCG 100
|||||||.||....|.||..|.||.||||||.|.||||||||.|||||.|
BSU35600___tu 51 TTCAACCATGTGTATTACAATCATACAAATTGTTCAGTTTGCCCTGCTTG 100
BSNT_05421___ 101 GCAATATCATGACAATTGCTGAATTCGGTTTGGTCGGGATGCTGACCACT 150
|.|||||.|||||..|..|.|||||.||..|.|||||.|||.|.||.||.
BSU35600___tu 101 GAAATATGATGACCTTAACAGAATTTGGGCTTGTCGGCATGATCACAACG 150
BSNT_05421___ 151 GTTACTATTTTCACACAAATTGTACTCGATATGGGATTTGGAGCCGCTTT 200
|||||..|||||.|.||.|||||.|||||||||||.|||||.||.||.||
BSU35600___tu 151 GTTACAGTTTTCGCCCAGATTGTGCTCGATATGGGTTTTGGCGCAGCATT 200
BSNT_05421___ 201 AATTCAAAAGGAGAATATC---AGTGAACGCCAATTATCTACTTTGTATT 247
||||||.| ||||..| | |..||.|||||..|.||.||.|||||||
BSU35600___tu 201 AATTCAGA--GAGACGA-CGCGACGGAGCGCCAGCTGTCAACATTGTATT 247
BSNT_05421___ 248 GGCTGAATATCTTAACAGGTATCCTTT---TGTTTATCGGCCTGTTTTGC 294
||||.||.||..|.||.|| |.||| |||||.| |.||||..
BSU35600___tu 248 GGCTTAACATTATGACGGG---CGTTTTGCTGTTTGT-----TCTTTTAT 289
BSNT_05421___ 295 CTG-----AGTCCCTTTATCGCAGACTTTTATCAGCGTGACGAACTGGTT 339
.|| |||||..|.||.||.|..||||||||..|.||.||.|||||.
BSU35600___tu 290 ATGTGAGCAGTCCTGTCATTGCGGGATTTTATCAAAGAGAAGAGCTGGTG 339
BSNT_05421___ 340 TTTCTTGTGCGGATTTTGGCCGGCATGTTTTTAATCGCCCCGGTCGGGCA 389
|||||.||.||||||.||||....||||||||.|||||.||..|.||.||
BSU35600___tu 340 TTTCTGGTTCGGATTCTGGCGATTATGTTTTTGATCGCGCCAATTGGACA 389
BSNT_05421___ 390 GCAGTATCAATATATGCTGCAAAAAGAACTGAAGTTCAATGTGTTGAGCA 439
|||.|||||.||||||||||||||..|.|||.|.||.|||..|||.||||
BSU35600___tu 390 GCAATATCAGTATATGCTGCAAAAGCAGCTGCATTTTAATACGTTAAGCA 439
BSNT_05421___ 440 AAATAGAAGCCGGGGTCACCATTTTGTCATTTG---TGCTCCTGCTCG-- 484
||||||| .|||||.|||..|| || ||.| |||
BSU35600___tu 440 AAATAGA------------GATTTTTTCAAATGTATTG-TCAT--TCGGA 474
BSNT_05421___ 485 --TTT--------TGGTTTTTCTGATGGATCCAATTGTGGCCTATGCATT 524
||| .|||||||.||||||||.|.|||.||||.||.|...|
BSU35600___tu 475 TATTTAGCGATAGCGGTTTTTATGATGGATGCGATTTTGGCGTACGTGAT 524
BSNT_05421___ 525 TTCACAAGTTTTTCTTAATTCGGTTAAAGGCATCTTGTTTTTTGCTGTAT 574
|||.|||||..|.||..|.||...||||||.||.||.|.||..|||||||
BSU35600___tu 525 TTCTCAAGTCCTGCTGCAGTCCAGTAAAGGGATTTTATATTGGGCTGTAT 574
BSNT_05421___ 575 ATTTTAAAAAATGGCGTCCTTCTTTTGTCTTTGCATT--AGGGGAAGTGA 622
|....|||||.||||.||||.|||||||.|||| ||| ||.||.| |||
BSU35600___tu 575 ACCGAAAAAAGTGGCATCCTGCTTTTGTTTTTG-ATTTGAGAGGCA-TGA 622
BSNT_05421___ 623 AAGAATTTTTCTCTTTCGGCGCATTTCAGCTTGCTTCCAGGCTTGTAAAC 672
|.||.||.||.|||||.||.||.|||||||||.|.|||.|.|||||.|||
BSU35600___tu 623 AGGATTTCTTTTCTTTTGGAGCCTTTCAGCTTTCATCCCGTCTTGTGAAC 672
BSNT_05421___ 673 AGACTTGGCGCCAATATCGACATGATTTTGATCGGACGGTTTCTCGGTGC 722
||.||.||.||.|||||||||||||||||||||||.||||||.|.|||||
BSU35600___tu 673 AGGCTGGGAGCAAATATCGACATGATTTTGATCGGCCGGTTTATTGGTGC 722
BSNT_05421___ 723 GGAAGCTTTGGGAATCTATAACCTAGCTTATCAGATTATTACGATTCCCG 772
.|||||.|||||.||.||||||||.||||||||||||.|.||.|||||.|
BSU35600___tu 723 TGAAGCATTGGGGATTTATAACCTCGCTTATCAGATTGTCACCATTCCGG 772
BSNT_05421___ 773 TGTTAAAAATCAACCCGATCGTGACACGGGTAGCGTTTCCTGTCTTCTCA 822
|.||.||.|||||.|||||.||.||||||||.||.||.|||.|.|||.||
BSU35600___tu 773 TTTTGAAGATCAATCCGATTGTCACACGGGTGGCATTCCCTATTTTCGCA 822
BSNT_05421___ 823 AAAAATAAGGGAGATAACCGAACGCTGC-------GCGAAGGTTTTTTAA 865
|||||.|| ||| .|||..|.|| |.|||||.|||.|.|
BSU35600___tu 823 AAAAACAA-----ATA--TGAAAACAGCGTGATCAGAGAAGGCTTTCTGA 865
BSNT_05421___ 866 ATATGACAAAGCTTCTCGCACTGATTTCATTCCCGCTTCTGATCGGACTG 915
||||||||||..|.||.||.||..||||.||.|||||..|.|||||.||.
BSU35600___tu 866 ATATGACAAAAATGCTGGCGCTTGTTTCGTTTCCGCTGTTAATCGGGCTC 915
BSNT_05421___ 916 ATGACTGTTTCAGATTTATTTATTGAAGTCGCCTTCGGAGAAAAATGGC- 964
.||.||||.|||||....|||||...||..|..||||||||||||||||
BSU35600___tu 916 GTGTCTGTGTCAGACGCCTTTATCACAGCGGTTTTCGGAGAAAAATGGCT 965
BSNT_05421___ 965 TGCAGGCTGTACCAGTTCTGAACATCCTCGCGATTGTCGGACTCCTCAGG 1014
||| .|||||.||..|.||.||..|.||.||||||||||||.|.||.||.
BSU35600___tu 966 TGC-TGCTGTTCCGATCCTAAATGTTCTTGCGATTGTCGGAATACTAAGA 1014
BSNT_05421___ 1015 GTTCTGATGAATCCGAACGGATCGGTTTTGCTGGCGAAGGGGAGAGCAGA 1064
||.||.||||||||.||.|||||.||.||||||||.||.||.|||||.||
BSU35600___tu 1015 GTGCTCATGAATCCAAATGGATCTGTGTTGCTGGCTAAAGGAAGAGCTGA 1064
BSNT_05421___ 1065 CCTGGCATTTTATTGGGACAGCGGGATCATGCTCCTTTATGGGCTGTCAC 1114
|.|.||.|||||||||||...|||..|..||||.||.||.||..|.||||
BSU35600___tu 1065 CTTAGCGTTTTATTGGGATTCCGGCGTGCTGCTGCTGTACGGATTATCAC 1114
BSNT_05421___ 1115 TTTATGCGGCGGTACTAAC--GAA---TGATTTGACGACCACCGCCTGGA 1159
|.|.|||.||.||||..|| ||| ||.| |||...|||.|||.
BSU35600___tu 1115 TGTTTGCAGCTGTACAGACGGGAAGCCTGCT-----GACAGTCGCATGGG 1159
BSNT_05421___ 1160 CATATGCAGCGATCAGCCTGATTAATTTCTTTATTGGCAGATGGCT---- 1205
..|||||....||||||.|..||||||||.|.|||||..|.|||||
BSU35600___tu 1160 TGTATGCCATTATCAGCGTTGTTAATTTCCTGATTGGGCGCTGGCTTTTG 1209
BSNT_05421___ 1206 GCTCAAATATGTCATTCAGCTGA-------AGCTGGGCGTATATTT---- 1244
|| |||||||||..||||.| |||| |||||
BSU35600___tu 1210 GC----ATATGTCATCAAGCTTAACCTTTCAGCT-------TATTTCCAG 1248
BSNT_05421___ 1245 TCGAACCGTTGGAAAACCGCTCACCTTGACGCTGCTTATGGCATTGCT-- 1292
|||| || .|||.||...||.|| |||.||
BSU35600___tu 1249 TCGA----TT---------------ATGAAGCCATTTCTG--ATTACTGC 1277
BSNT_05421___ 1293 GGCGCTTGTCTTGAGCG---TTGG---------CAG---CAGACATCTGC 1327
||||.|.|.|.|.|.|| |||| ||| |..||| |
BSU35600___tu 1278 GGCGATGGGCATCATCGCGTTTGGTGTAAGCCTCAGTACCGAACA----C 1323
BSNT_05421___ 1328 TTCA------CGGC-GCCATGCTTCAGCTGACAGTTTCAGTCGGGATAAG 1370
|||| .||| |..||| |.||||.|..|||||||.|.| |
BSU35600___tu 1324 TTCAGTATGCAGGCAGAAATG---CGGCTGGCCATTTCAGTTGCG----G 1366
BSNT_05421___ 1371 CGGG-----------ATTTTTTACGTTTTTTTGGT--------------- 1394
|.|| ||.| |.||.|||||||
BSU35600___tu 1367 CTGGGGCGCTGTGCTATCT----CTTTCTTTTGGTAAAAGCGTACCCTCA 1412
BSNT_05421___ 1395 ------CAGCAAATTATATCGGCGGGCTATGAGGGCCCAATTAGGAAG-- 1436
.||||||.|| |||.|| || ||||.|
BSU35600___tu 1413 AACGAAAAGCAAACTA----------CTAAGA------AA--AGGACGTT 1444
BSNT_05421___ 1437 ----ATGA 1440
||||
BSU35600___tu 1445 TGTCATGA 1452
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