Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05420 and BSU35590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_05420___tuaC.1.22522.seq
# -bsequence dna-align/BSU35590___tuaC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05420___tuaC-BSU35590___tuaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05420___tuaC-BSU35590___tuaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05420___tuaC
# 2: BSU35590___tuaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1287
# Identity: 790/1287 (61.4%)
# Similarity: 790/1287 (61.4%)
# Gaps: 228/1287 (17.7%)
# Score: 2171.0
#
#
#=======================================
BSNT_05420___ 1 TTGAAGGTTCTTTGGATTACCAGTGTTTATCCAAGTAGTCAAAAACCGGG 50
.|||||.||.|.|||||.||.||.||.|||||.||.|||...|||||.||
BSU35590___tu 1 ATGAAGATTTTGTGGATCACAAGCGTATATCCGAGCAGTATGAAACCCGG 50
BSNT_05420___ 51 AGAAGGTGTTTTTCATGAAACACAGGTTCAGGCGTTGTATATGC-AGGGC 99
|||.|||||.||||||||.||||||||.||.|.|.||.|.|..| .||||
BSU35590___tu 51 AGAGGGTGTGTTTCATGAGACACAGGTGCAAGAGCTGCAAAAACTCGGGC 100
BSNT_05420___ 100 GTTGATGTGACAGTCATATGTCCATTACCTGTGAACCCTGCTCCTCTGAG 149
|||||.|.||.||.|||||.|||...|||.|..|..|.||.|||.|..|
BSU35590___tu 101 -TTGATATCACTGTGATATGCCCACGGCCTTTTCATTCAGCACCTGTCCG 149
BSNT_05420___ 150 GCTGTTGAAAAAAAAGTACCGCCAAACACGAA---CAGTCCCGGAATATG 196
..||.|||||||.|..||.|| |||.|.|.| ||| .|||||.||||
BSU35590___tu 150 CATGCTGAAAAAGACATATCG--AAAAAAGGATGTCAG-ACCGGAGTATG 196
BSNT_05420___ 197 AAGA-AAGAAAAGGTATCCCGGTTTACAGACCACCATATACAGCTCTGCC 245
||| .|||||.||.||.|||||||||.|.||....|||...||..|.||
BSU35590___tu 197 -AGATTAGAAAGGGGATACCGGTTTACCGGCCTTTCTATCGGGCAGTTCC 245
BSNT_05420___ 246 GGGACAGCTAAAATGGGCTCAGCCGCATCGCCGGATCGCAAAGTCA---G 292
.||.|||||.||.|||||.|||||.|||||..|.|||||| ||| |
BSU35590___tu 246 CGGCCAGCTGAAGTGGGCGCAGCCTCATCGGAGAATCGCA---TCAGCCG 292
BSNT_05420___ 293 TATTGAGGACGATCGAGAAGTACAGCCTTGCG--------CCGAATCTTA 334
|.||.|..||.|| ||| ||||| ||| |||.||||.|
BSU35590___tu 293 TTTTAAAAACAAT---GAA--ACAGC---GCGACCTATATCCGGATCTGA 334
BSNT_05420___ 335 TCCATGCCCATTTCGCGATGCCATC---CGGGGGTGCCGCTGCCGT-TAT 380
|||||||.|||||.||.|||||||| |||||.|||.||.|.||| |
BSU35590___tu 335 TCCATGCGCATTTTGCCATGCCATCGGGCGGGGCTGCGGCAGTCGTGT-- 382
BSNT_05420___ 381 TGCACAGAGGCTG----AAGGTTCCTTATGTTCTAACTTTGCACGGAAGC 426
|||||.|.| || ||||||||||.||.||.|||||.||.||.
BSU35590___tu 383 ----CAGAGTCAGCGCAAA--TTCCTTATGTCCTGACCTTGCATGGCAGT 426
BSNT_05420___ 427 GATGTCAATATTTATCCTCATTACAGCAAAGGCGCTTTTCGAGCATTTGA 476
|||||.|||.|.|||||.||||||||||||||.||.|||..|||.||..|
BSU35590___tu 427 GATGTGAATGTCTATCCGCATTACAGCAAAGGTGCGTTTAAAGCCTTCAA 476
BSNT_05420___ 477 TATGGCTGTGC--------ATGCTGCAGCTAAAGTTTTGGCTGTCAGC-- 516
|| |||| .|||..|||.| |||||.||.||||||
BSU35590___tu 477 ----GC-GTGCCGTAGGTTCTGCGTCAGTT---GTTTTAGCAGTCAGCCA 518
BSNT_05420___ 517 GATGCTT--TGA--AAGCCAAAACAAAAGAAATGACCGGTGC--TGATTG 560
.|.|||| .|| |||||| |||||...| ||| || |||..|
BSU35590___tu 519 CAAGCTTCAGGAAGAAGCCA----AAAAGCTTT---CGG-GCTTTGACAG 560
BSNT_05420___ 561 CTCGGTGCTTCCTATCGGCGTCAACCTGGACAATTTTCA----------- 599
||||||..|.||.||||||.|..|.||...|..||||||
BSU35590___tu 561 CTCGGTTTTGCCAATCGGCATACAGCTCAGCCGTTTTCAGGGGAATGAGG 610
BSNT_05420___ 600 -----AAA----AAACTCCGCTTCAACACTTGAATTGAGGGAGAAACTCG 640
||| ||| ||| ||| |.|.|||||
BSU35590___tu 611 AGACGAAAGAGGAAA-------TCA------GAA-------AAAGACTCG 640
BSNT_05420___ 641 GCTTGCCGACAGA-CAAAAAATTGCTGACGTTCGTCGGTCGCTTGGTGAA 689
|..|.|||...|| ||.....|.||||.| |..|||||.||..||||.|.
BSU35590___tu 641 GACTCCCGCTCGATCAGCGTCTGGCTGTC-TATGTCGGCCGGCTGGTCAG 689
BSNT_05420___ 690 AG-GAAAGGGTGTAGCC------GAGCTGGCTGAAGCGGTCAGGTCGCTT 732
|| |||||| | ||.|||.||||||||.||...|||||.
BSU35590___tu 690 AGAGAAAGG-------CATTTTTGAACTGTCTGAAGCGATCGAATCGCTG 732
BSNT_05420___ 733 GATGACAGCTAC--AGAGCTGTATTCATCGGCGATGGACCGGAGAAGCAG 780
.|.||| .||.| || ||.||.||..||||.|||||.|
BSU35590___tu 733 CAGGAC-TCTCCTAAG-GCAGTCTTTGTCGGGGATGGTC----------- 769
BSNT_05420___ 781 CATATCCGTCAAATCGCCGGTGA---AAAA---GCAATAT--TAATGGGG 822
|||..||||||.||.||| |.|| || |||| |.|..||.
BSU35590___tu 770 -----CCGCAAAATCGACGCTGACGCAGAAGGGGC-ATATCGTCACAGGC 813
BSNT_05420___ 823 CAGGTCTCAAACCTTCAAATATCTGAATATCTGGCTGCCTCTGATCTGTT 872
||.|||.|.||.|.|||..||...||.|||.|...|||..|.|||||.||
BSU35590___tu 814 CAAGTCCCGAATCATCAGGTAAGAGACTATTTACTTGCGGCAGATCTATT 863
BSNT_05420___ 873 TGTGCTCCCTTCGTATTCA--GAAGGGATGCCGACTGTTGTCATTGAAGC 920
.||.||.|||||.|| || ||.|||||||||||||||||.|||||.||
BSU35590___tu 864 CGTACTTCCTTCTTA--CAGTGAGGGGATGCCGACTGTTGTGATTGAGGC 911
BSNT_05420___ 921 GCTCGCCCTCAAGGTTCCGGTGCTTTGTACGGCGGTCGGAGGGGTTCCGT 970
|||.||.||.|.||||||.||..|||||||||..||.||.||.||..|||
BSU35590___tu 912 GCTGGCGCTAAGGGTTCCTGTTATTTGTACGGATGTTGGCGGAGTGTCGT 961
BSNT_05420___ 971 CTTTATTCGGAAAGCATGAACATCTGCTGATCAAGCC-----CCGCTCGG 1015
||||||||||||||||..|||||||||||||.||.|| ||||
BSU35590___tu 962 CTTTATTCGGAAAGCACCAACATCTGCTGATTAAACCGAAATCCGC---- 1007
BSNT_05420___ 1016 CTTCAAGCATT-ACAGAAGCTGTCA---------------AGGGATATTT 1049
||||||.|| .|.|||||..||| | |.|.||.|
BSU35590___tu 1008 --TCAAGCCTTGGCGGAAGCGATCACTCGGTACGAACATGA-GCAAATAT 1054
BSNT_05420___ 1050 GGAAGTCGGCACTTGGCAAGAAGTCATTGCTGAAGAACTGTATCAAACGG 1099
|||||.|| |||| |.||.||.||..|||||.||||.|
BSU35590___tu 1055 GGAAGCCG-----------GAAG---TAGCAGATGACTTGTATGAAACCG 1090
BSNT_05420___ 1100 TGCTCGATGATTATGACGCCTTTCAAAATGCCGGCAAG---TTGCTGGAT 1146
|||..|.|.|.|.||||||.....|||| ||.|||| ||||...||
BSU35590___tu 1091 TGCAGGCTCAATTTGACGCAGGAAAAAA---CGCCAAGGCCTTGCATCAT 1137
BSNT_05420___ 1147 GTGTATAAGGATGTTGTCAAGAACAA-------TTAA 1176
..||||.| ||.| ||||.||| || ||||
BSU35590___tu 1138 CAGTATCA-GACG--GTCACGAA-AACGTCCGTTTAA 1170
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