Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05415 and BSU35570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_05415___tuaE.1.22522.seq
# -bsequence dna-align/BSU35570___tuaE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05415___tuaE-BSU35570___tuaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05415___tuaE-BSU35570___tuaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05415___tuaE
# 2: BSU35570___tuaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1588
# Identity: 1008/1588 (63.5%)
# Similarity: 1008/1588 (63.5%)
# Gaps: 254/1588 (16.0%)
# Score: 2868.0
#
#
#=======================================
BSNT_05415___ 1 ATGAGTCTCAAACGTTCCGCGGTCAAT--------GTT-CTGG------- 34
.|||||.|||||||.||.||||||.|| ||| ||||
BSU35570___tu 1 GTGAGTATCAAACGATCAGCGGTCCATACGCTAGCGTTACTGGCCGCTGC 50
BSNT_05415___ 35 ----TTTGG-CTCGCCGCATTGACCGCAGGGTTAG-CATGCAT-----TG 73
||||| .|||.|..||| ||.||| || |||.||| |.
BSU35570___tu 51 TATATTTGGAGTCGTCCTATT----GCTGGG--AGCCATCCATAAAGATA 94
BSNT_05415___ 74 TA--TTGGCCCAATCCAATGCAAAAAAAAT-----CT-TGCTAGCATGTC 115
|| || || |||| |.|| || ||||.|| .||.
BSU35570___tu 95 TAGGTT-------TC--ATGC-----AGATGGCTGCTGTGCTTGC-GGTG 129
BSNT_05415___ 116 T----AATT---ATGATTGCACTGAC---TTCGATCGTTGTGCTCAGGAA 155
| |||| .||.||..|||||| |.|.|.|| ||
BSU35570___tu 130 TTGGCAATTGGCCTGTTTTTACTGACGCTTGCAACCG-------CA---- 168
BSNT_05415___ 156 GTATATGTCATCTGAGCAATTGC---TAATGCCCGTA--TTATATTTGCT 200
|.|| ||.|..|..||..|| |.|||.|.||| .||||||| |
BSU35570___tu 169 -TTTA---CAACAAAAGAACGGCTCTTTATGGCTGTAATCTATATTT--T 212
BSNT_05415___ 201 GATCG-CTGCAACTTTTGCCAACAATGCTTTTTTTACGATTAAATTGGGC 249
||||| |||| ||||||...||.|||||.||||||.|.|||.|..|.||.
BSU35570___tu 213 GATCGCCTGC-ACTTTTTTAAATAATGCATTTTTTGCCATTCATCTTGGA 261
BSNT_05415___ 250 TTTTTCAGCCTGTTTCCATATCGAATTCTTCTGATT----CTGGCAGGAT 295
||||||||..||||.|..||.||..||||.||.||| |.||..|..|
BSU35570___tu 262 TTTTTCAGTTTGTTCCTTTACCGGCTTCTGCTCATTGCAGCGGGTTGCCT 311
BSNT_05415___ 296 TCATATT-----CATAG--CAGAAATGTTGAAAGGCAGCCGACACCTTGA 338
||||||| |||.| |.||| |.||| || ||..||||
BSU35570___tu 312 TCATATTTTCGGCATGGTTCGGAA---TCGAA------CC--CATATTGA 350
BSNT_05415___ 339 AAAGTGGAATCAGGTGCGTGTCAAAGGCATACTAATGTTTTTCGCATTTT 388
||..|||.||..|.|||..||.|||||.||..||.|.||||||||.||||
BSU35570___tu 351 AAGATGGCATGGGCTGCAAGTAAAAGGGATTTTACTCTTTTTCGCCTTTT 400
BSNT_05415___ 389 GGTTCTGT-TATGGAATGATTTCACTGCTTTGGGTCAAATCTGTTACTGA 437
|||| |.| |||||..|..||||.|||||.||||.|||.||.||.||.|.
BSU35570___tu 401 GGTT-TATATATGGCCTTGTTTCTCTGCTGTGGGCCAAGTCGGTAACAGT 449
BSNT_05415___ 438 TGGCATAAAATATATGTTCCTATTGGCAATGGGAATGTTCTTCGTTTTTC 487
||||.|.||.|||.|...|.|||||||||||||.||.||||||.|||.||
BSU35570___tu 450 TGGCCTCAAGTATTTAGCCTTATTGGCAATGGGGATCTTCTTCATTTATC 499
BSNT_05415___ 488 TGATTGTCATGTTTTTTCAAAAATTGGATCGCATTTTCGC-----AT--T 530
|.||||||||||...|.||||||.||||.|| || || |
BSU35570___tu 500 TTATTGTCATGTACGTGCAAAAAATGGAGCG-------GCTGATGATTGT 542
BSNT_05415___ 531 TTATTACATATGGCTGGTCATGACCGTATTTGTAATGGGGATAGGGTTTT 580
||||..|||.||||||||.|||||.||||||.|.|||...||.||.||||
BSU35570___tu 543 TTATGCCATTTGGCTGGTGATGACGGTATTTCTGATGATCATTGGTTTTT 592
BSNT_05415___ 581 ACAATCACTTTACATTCAACCACC-------TGCCGAGCTCGACCCTTTA 623
||||||| || |||.||||| || ||||.||.||..|.||
BSU35570___tu 593 ACAATCA---TA---TCACCCACCATCATCTTG-CGAGTTCCACATTGTA 635
BSNT_05415___ 624 CAACGGGCCGCACTATAAACAGCACTATCCGACATCCGTTTTTTTCAATC 673
||.|||.|||.|.||.||.|||||.|||||||||||.||.|||||.||||
BSU35570___tu 636 CAGCGGACCGGAGTACAAGCAGCATTATCCGACATCGGTCTTTTTTAATC 685
BSNT_05415___ 674 AAAATGACTTTGCGACATTTCTGTCCATCAGCTTTTGCTTTTATTTATCT 723
||||||||||||||||.|||.|.||||||||||| ||||| |||| |.
BSU35570___tu 686 AAAATGACTTTGCGACCTTTTTATCCATCAGCTT---CTTTT-TTTA-CA 730
BSNT_05415___ 724 T-----TTTTCAAAAACATTAAAAACAGCTATTTAAAAATAGCAGGATTG 768
| |..|.|||||||||||.||..|.||..|.|| .||| ||||
BSU35570___tu 731 TCACGATGATGAAAAACATTAAGAATGGATACATCAA---GGCA--ATTG 775
BSNT_05415___ 769 ATCCTTG------CGTTCTGTTCGGCCTACTTGATTTTTCTGACTGGATC 812
.||||| ||.|||||.||...||.||.||||||...|||||.||
BSU35570___tu 776 -GCCTTGTGCTCTCGCTCTGTGCGTTGTATTTAATTTTTGCCACTGGTTC 824
BSNT_05415___ 813 AAGAGCCAGTATCCTAGGAGTTATAGCCGGACTTGCCGTTTATACGTTCA 862
|||||||||..|.||.||..||.|.||.||..||||.||.||.|..||||
BSU35570___tu 825 AAGAGCCAGCCTTCTGGGCATTTTTGCAGGTATTGCTGTCTACATCTTCA 874
BSNT_05415___ 863 TT---TTGCTGCCGAAGATGCTTAAAA---AATGGGCGCT-CATCGCCG- 904
|| ||||.||| ||.||.||| |||| ||| .||.||.|
BSU35570___tu 875 TTGTATTGCCGCC-----TGTTTTAAAGAGAATG---GCTATATGGCTGT 916
BSNT_05415___ 905 CAGCTGCAGGATGTATCGCTTTTGTCAC---CCTGTTTG-CAGGAAAGAT 950
|.||.||.||| ||.|||.||.||.| .||.||.| |||.||| ||
BSU35570___tu 917 CGGCGGCGGGA---ATTGCTCTTTTCGCAGTTCTTTTCGCCAGCAAA-AT 962
BSNT_05415___ 951 -TACT----------GGAGCTTTTTATACATACTTTTTAGCTCCGCAAAC 989
||.| |||||| .|||.|.||.|||||.||
BSU35570___tu 963 CTATTCAAAGTTTTGGGAGCT-----------GTTTCTGGCCCCGCAGAC 1001
BSNT_05415___ 990 AATACA--CGATTTCA-GCGAGCCGCTGCCATCCAATGTAGGGAGGGCAA 1036
..|.|| | |||||| |..|| |||.|||||.|||||.|...||||||
BSU35570___tu 1002 GCTGCATTC-ATTTCATGACAG--GCTTCCATCAAATGTGGCTCGGGCAA 1048
BSNT_05415___ 1037 ACTTGTTGAAAAACGCCGGCCATTATGTGCTGGATACTTACGGATTTGGC 1086
|..||.||||||||||..|.||||.|.|.||.|||.|.||||||||.||.
BSU35570___tu 1049 ATCTGCTGAAAAACGCTTGGCATTTTTTCCTTGATTCATACGGATTCGGA 1098
BSNT_05415___ 1087 GTTGGCGCAGGCAATGTACCTTATTATTTGGAACATCATGCACTGTTCGA 1136
||.||.|||||.||||||.|.||||||.|.||.|||.||||..|.|..||
BSU35570___tu 1099 GTCGGGGCAGGAAATGTATCCTATTATCTTGAGCATTATGCTGTATATGA 1148
BSNT_05415___ 1137 TACGGATCAGGTCGTCGAGGTTCATAACTGGCTCGTTGAGA-TCATGACG 1185
|||.||..|.||.|..|||||.|||||||||||.|||||.| ||.|| |.
BSU35570___tu 1149 TACTGACAATGTGGCAGAGGTGCATAACTGGCTTGTTGAAATTCTTG-CT 1197
BSNT_05415___ 1186 AACTTTGGAGTTG-TGATGATGCTCGGTTATTTAACAATGTACATTTAT- 1233
||.||||| .||| |.||.|||||.||.|||| |||.|.|||||
BSU35570___tu 1198 AATTTTGG-TTTGTTCATCATGCTGGGATATT------TGTCCGTTTATG 1240
BSNT_05415___ 1234 -----TTAATAACTGTGCTTTACCGGTATTATAAAAGATCGCTTGGAAGG 1278
.|.|||...|||||||||..||.||||.|||||....|.|.||..
BSU35570___tu 1241 CCTACCTCATATGGGTGCTTTACAAGTTTTATGAAAGAAAATTAGAAAAT 1290
BSNT_05415___ 1279 CGGCCAAAGCTTCTCATTGAAGGTTTGACAGCCGCGCTTGTCGCTTTCCT 1328
|.|.||||.||..|||..|||||..|.|...||||..|.|||..||||||
BSU35570___tu 1291 CAGTCAAAACTGATCACAGAAGGACTTATTACCGCTATGGTCAGTTTCCT 1340
BSNT_05415___ 1329 TGTGTCAAGTATCAGCCCGAGTTCCGTTTCGAATTTATACTTCCATTGGG 1378
.||.||||||||||||||.||.||.|||||.|||||||..||||||||||
BSU35570___tu 1341 GGTATCAAGTATCAGCCCAAGCTCTGTTTCAAATTTATTTTTCCATTGGG 1390
BSNT_05415___ 1379 TGTTTCTCGCCCTTGTTATAGCGGC----AATTAACACTTTTA----GAA 1420
|||||.|.||.||.||.||.||.|| ||| .|.||| ||.
BSU35570___tu 1391 TGTTTATGGCGCTCGTCATCGCCGCCGTGAAT-----GTGTTAAGGCGAT 1435
BSNT_05415___ 1421 TCAGCGGAACAGATG---AAACCGAACAGTATAGATAA 1455
.||| |||.||| .|.|||| .|||.||||||
BSU35570___tu 1436 CCAG----ACAAATGCCTGAGCCGA--TGTACAGATAA 1467
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