Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05412 and BSU35550

See Amino acid alignment / Visit BSNT_05412 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence dna-align/BSNT_05412___tuaG.1.22522.seq
#    -bsequence dna-align/BSU35550___tuaG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05412___tuaG-BSU35550___tuaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05412___tuaG-BSU35550___tuaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05412___tuaG
# 2: BSU35550___tuaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 783
# Identity:     587/783 (75.0%)
# Similarity:   587/783 (75.0%)
# Gaps:          48/783 ( 6.1%)
# Score: 2167.0
# 
#
#=======================================

BSNT_05412___      1 ATGACGAGGCAA----AAACCTTTAATCTCTGTCATTACGCCTTCCTATA     46
                     |||||    |||    ||||||.|..|.|||||||||||.||||||||||
BSU35550___tu      1 ATGAC----CAATTGGAAACCTCTCGTATCTGTCATTACACCTTCCTATA     46

BSNT_05412___     47 ACGCGGAGGAATATATCGAAAAAACCATTCAGTCCGTCTTAAATCAGA--     94
                     |.|||...||.|||||.|||.|.||..||||.||.||.|||.||||||  
BSU35550___tu     47 ATGCGCGTGACTATATTGAAGACACGGTTCATTCGGTATTAGATCAGAGC     96

BSNT_05412___     95 CGTTTTCCGACTGGGAAATGATTATTGCGGATGATTGCTCAACAGATGGG    144
                     |.|..||  |.||||||||||||||.|.|||||||||||||||.||||||
BSU35550___tu     97 CATCCTC--ATTGGGAAATGATTATCGTGGATGATTGCTCAACGGATGGG    144

BSNT_05412___    145 ACAAGAGACATTTTGAAGCGCTATGAAGAAGAT-GATGACCGGATCCATG    193
                     ||..|.||||||||..|||..|||||| ||.|| ||.||..|.||.||||
BSU35550___tu    145 ACCCGCGACATTTTACAGCAGTATGAA-AAAATAGACGAAAGAATTCATG    193

BSNT_05412___    194 CTATTTTTCTGAAAGA-AAATCAAGGTGCTGCAGCTGCACG----AAATG    238
                     ...|.|.||||.|||| ||.|| .||.|||||.|.|||.||    ||| |
BSU35550___tu    194 TGGTGTATCTGGAAGAGAACTC-CGGAGCTGCGGTTGCTCGCAACAAA-G    241

BSNT_05412___    239 CG-------GCGCTCAGCAAAGCCGAAGGGCACTATGTCGCATTTTTGGA    281
                     ||       ||||||          ||||||.|||.||.|||||||||||
BSU35550___tu    242 CGTTGGAACGCGCTC----------AAGGGCGCTACGTAGCATTTTTGGA    281

BSNT_05412___    282 CAGCGATGATGTATGGAAAGCAGAAAAGCTGGAAAAGCAGCTTGCCTTCA    331
                     |||.|||||...|||||||..|||.||.||||||||||||||||..||.|
BSU35550___tu    282 CAGTGATGACAAATGGAAAAAAGACAAACTGGAAAAGCAGCTTGAGTTTA    331

BSNT_05412___    332 TGAGGAAGCATCAGC----ATGCTTTCACATTTACGGCATACGAGCTGAT    377
                     |||.|.|||    ||    .|||.|||.|.||.||||..||| ||||.|.
BSU35550___tu    332 TGATGGAGC----GCTCCTGTGCGTTCTCTTTCACGGGCTAC-AGCTTAA    376

BSNT_05412___    378 CAGC-CAAGACGGCAAACCACTTCATAAAACCATTCATGCACCCATGAGC    426
                     ..|| ||.|||||.|..||.||..|||||...||||||||.||....|||
BSU35550___tu    377 TGGCGCAGGACGGGACCCCGCTCGATAAATTTATTCATGCGCCGGAAAGC    426

BSNT_05412___    427 CTTACATATGATGATGTATTAAAAAATACGATTATTGGTTGCTTGACGGT    476
                     ||.||.||.|||||.|...|.||||||||.|||||.||.|||||||||||
BSU35550___tu    427 CTGACGTACGATGACGCCCTGAAAAATACAATTATCGGCTGCTTGACGGT    476

BSNT_05412___    477 AATGATTGACAGGGAGCAAACCGGTGATATCCGTATGCCGAATATTAGAA    526
                     .||||||||||||||||||||.||..|.||||..|||||||||||.||||
BSU35550___tu    477 GATGATTGACAGGGAGCAAACGGGACAGATCCAAATGCCGAATATCAGAA    526

BSNT_05412___    527 CCCGTCAGGATTTGGCGACATGGTTATCCGTATTAAAGCGGGGATTCAAG    576
                     |..|.|||||.||.||.||||||.|.||..|.|||||....|||||.|..
BSU35550___tu    527 CGAGACAGGACTTAGCCACATGGCTGTCTCTTTTAAAAAAAGGATTTACT    576

BSNT_05412___    577 GCATACGGACTGAACGAACCCCTCGCCGAATACCGCATCGTTGAAACATC    626
                     ||.||.|||.||||.|||..|||.||.|||||.||..|.||..|.|..||
BSU35550___tu    577 GCCTATGGAATGAATGAATGCCTGGCTGAATATCGGCTTGTCAATAATTC    626

BSNT_05412___    627 GATTTCCAGCAACAAATGGAAGGCTGCGAAAAAAACGTGGTTTGTCTACA    676
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU35550___tu    627 AATTTCCAGCAACAAATGGAAGGCTGCGAAAAAAACGTGGTTTGTCTACA    676

BSNT_05412___    677 GGGAGATCGAACGGCTTCATTTTATGAAAGCAACATGGTGTTTTGTTCAA    726
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35550___tu    677 GGGAGATCGAACGGCTTCATTTTATGAAAGCAACATGGTGTTTTGTTCAA    726

BSNT_05412___    727 TATGCAAAAAACGCGGTGAAAAAAAGATTATAG    759
                     |||||||||||||||||||||||||||||||||
BSU35550___tu    727 TATGCAAAAAACGCGGTGAAAAAAAGATTATAG    759


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