Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05380 and BSU35360
See
Amino acid alignment /
Visit
BSNT_05380 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05380___hag.1.22522.seq
# -bsequence dna-align/BSU35360___hag.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05380___hag-BSU35360___hag.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05380___hag-BSU35360___hag.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05380___hag
# 2: BSU35360___hag
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 952
# Identity: 754/952 (79.2%)
# Similarity: 754/952 (79.2%)
# Gaps: 71/952 ( 7.5%)
# Score: 3065.0
#
#
#=======================================
BSNT_05380___ 1 ATGAGAATTAACCACAATATCGCAGCGCTTAACACACTGAACCGTTTGTC 50
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU35360___ha 1 ATGAGAATTAACCACAATATTGCAGCGCTTAACACACTGAACCGTTTGTC 50
BSNT_05380___ 51 TTCAAACAACGGTGCGAGCCAAAAGAACATGGAGAAACTGTCTTCAGGTC 100
||||||||||.||||||||||||||||||||||||||||.||||||||||
BSU35360___ha 51 TTCAAACAACAGTGCGAGCCAAAAGAACATGGAGAAACTTTCTTCAGGTC 100
BSNT_05380___ 101 TTCGTATCAACCGTGCGGGAGATGACGCAGCGGGTCTTGCGATTTCTGAA 150
||||.||||||||||||||||||||||||||.|||||||||||.||||||
BSU35360___ha 101 TTCGCATCAACCGTGCGGGAGATGACGCAGCAGGTCTTGCGATCTCTGAA 150
BSNT_05380___ 151 AAAATGAGAGGACAAATCAGAGGTCTTGAAATGGCTTCTAAAAACTCTCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35360___ha 151 AAAATGAGAGGACAAATCAGAGGTCTTGAAATGGCTTCTAAAAACTCTCA 200
BSNT_05380___ 201 AGACGGAATTTCTCTTATCCAAACAGCTGAGGGTGCATTGACTGAAACTC 250
|||||||||.|||||||||||||||||||||||||||||.||||||||||
BSU35360___ha 201 AGACGGAATCTCTCTTATCCAAACAGCTGAGGGTGCATTAACTGAAACTC 250
BSNT_05380___ 251 ACTCTATTCTTCAACGTGTTCGTGAACTAGTTGTTCAAGCAGGAAACACA 300
|..|.||.|||||||||||||||||.||||||||||||||.||||||||.
BSU35360___ha 251 ATGCGATCCTTCAACGTGTTCGTGAGCTAGTTGTTCAAGCTGGAAACACT 300
BSNT_05380___ 301 GGTACTCAAG---ATGGTACTGACCTTCAAGCGATCCAAGACGAGATCAC 347
||.|||||.| |.|..|||||..|.|||.|.||.|||||.||.||
BSU35360___ha 301 GGAACTCAGGACAAAGCAACTGATTTGCAATCTATTCAAGATGAAAT--- 347
BSNT_05380___ 348 TTCA-CTTGTT----GAAGAAATCGGTGGCGGAACAAACGCTAACGGTAT 392
|||| || || ||.||||||| |.|||||
BSU35360___ha 348 TTCAGCT--TTAACAGATGAAATCG------------------ATGGTAT 377
BSNT_05380___ 393 CTCTGACCGTACTGAGTTTAACGGTAAAAAACTTCTTAATGGCGATTTC- 441
.||..|.|||||.||.||.||.|||||.|||.|.||..|||||..||.|
BSU35360___ha 378 TTCAAATCGTACAGAATTCAATGGTAAGAAATTGCTCGATGGCACTTACA 427
BSNT_05380___ 442 ----TCGCA-AGCTA--GCGGTAAATCA-------TTAACATTCCAAATC 477
|..|| ||||| .|.|.|||||| ||...||||||||||
BSU35360___ha 428 AAGTTGACACAGCTACTCCTGCAAATCAAAAGAACTTGGTATTCCAAATC 477
BSNT_05380___ 478 GGAGCTA-------ACAGCAGTCAACAGCTTTCTGTCAACATTGAAAGCA 520
|||||.| |||||| || |.|||||.||.|||||....|
BSU35360___ha 478 GGAGCAAATGCTACACAGCA---AA----TCTCTGTAAATATTGAGGATA 520
BSNT_05380___ 521 TGGCAGCT-ACAGCAATTGGTGCTTTAGATACAGACGGTACGA---CACT 566
|||..||| || ||..||||...|..|||..|.||.|||.|.| ||..
BSU35360___ha 521 TGGGTGCTGAC-GCTCTTGGAATTAAAGAAGCTGATGGTTCAATTGCAGC 569
BSNT_05380___ 567 TCTTACTGGACAAGCAGTATCTGACATCGACGTAACAAAATTTAAAGATA 616
|||| ||..||||...|||..|.||||||||||||||...|||||
BSU35360___ha 570 TCTT------CATTCAGTTAATGATCTTGACGTAACAAAATTCGCAGATA 613
BSNT_05380___ 617 ATGCGGCTGACACTGCTACTGTAGGATTCAATGCTCAACTTAAAACAGTT 666
||||.||.||.||||||..|.|.||.|||.||||||||.|.|||...|||
BSU35360___ha 614 ATGCAGCAGATACTGCTGATATCGGTTTCGATGCTCAATTGAAAGTTGTT 663
BSNT_05380___ 667 GATGACGCAATCAACACAGTTTCTAAACAACGTTCAAAATTAGGTGCGGT 716
|||||.||.||||||..|||||||...||||||.|.||..|.||||||||
BSU35360___ha 664 GATGAAGCGATCAACCAAGTTTCTTCTCAACGTGCTAAGCTTGGTGCGGT 713
BSNT_05380___ 717 ACAAAACCGTCTTGAGCACACAATCAACAACTTAAGCGCTTCTGGTGAAA 766
||||||.|||||.|||||||||||.|||||||||||||||||||||||||
BSU35360___ha 714 ACAAAATCGTCTAGAGCACACAATTAACAACTTAAGCGCTTCTGGTGAAA 763
BSNT_05380___ 767 ACCTGACTGCTGCTGAGTCTCGTATCCGTGACGTTGACATGGCGAAAGAA 816
||.||||.|||||||||||||||||||||||||||||||||||.|||||.
BSU35360___ha 764 ACTTGACAGCTGCTGAGTCTCGTATCCGTGACGTTGACATGGCTAAAGAG 813
BSNT_05380___ 817 ATGAGCGAGTTCACAAAGAACAACATTCTTTCTCAGGCTTCTCAAGCGAT 866
||||||||.||||||||||||||||||||||||||||||||||||||.||
BSU35360___ha 814 ATGAGCGAATTCACAAAGAACAACATTCTTTCTCAGGCTTCTCAAGCTAT 863
BSNT_05380___ 867 GCTGGCTCAAGCAAACCAACAACCGCAAAACGTACTTCAATTATTACGTT 916
|||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU35360___ha 864 GCTTGCTCAAGCAAACCAACAGCCGCAAAACGTACTTCAATTATTACGTT 913
BSNT_05380___ 917 AA 918
||
BSU35360___ha 914 AA 915
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.