Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05377 and BSU35340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05377___fliD.1.22522.seq
# -bsequence dna-align/BSU35340___fliD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05377___fliD-BSU35340___fliD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05377___fliD-BSU35340___fliD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05377___fliD
# 2: BSU35340___fliD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1501
# Identity: 1386/1501 (92.3%)
# Similarity: 1386/1501 (92.3%)
# Gaps: 8/1501 ( 0.5%)
# Score: 6479.0
#
#
#=======================================
BSNT_05377___ 1 ATGGTCACAAGAATAACAGGTCTGGCGTCAGGAATGGATATAGATGATAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 1 ATGGTCACAAGAATAACAGGTCTGGCGTCAGGAATGGATATAGATGATAT 50
BSNT_05377___ 51 TGTATCAAAGCTGATGCAGACAGAAAGAGCCCCGCTTGATAAGCTGAAGC 100
.|||||||||||||||||||||||||||||.||||||||||||||||..|
BSU35340___fl 51 CGTATCAAAGCTGATGCAGACAGAAAGAGCGCCGCTTGATAAGCTGACAC 100
BSNT_05377___ 101 AAAAAAAGCAGACTCTTGAATGGCAGCGTGACAGCTATCGTGAAGTCAAT 150
||||||||||||||||||||||||||||||||||||||||||||||.||.
BSU35340___fl 101 AAAAAAAGCAGACTCTTGAATGGCAGCGTGACAGCTATCGTGAAGTAAAC 150
BSNT_05377___ 151 ACAAAAATAAAAGAATTGCAAGATTATATGTCTAAAAATACGTTGACATA 200
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 151 TCAAAAATAAAAGAATTGCAAGATTATATGTCTAAAAATACGTTGACATA 200
BSNT_05377___ 201 TCCTAGCACGTATCAGAGCAAAACTGTGACAAGCTCTAATGAGTCTGTGT 250
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 201 TCCGAGCACGTATCAGAGCAAAACTGTGACAAGCTCTAATGAGTCTGTGT 250
BSNT_05377___ 251 TAACTGCTACAGGAAGCGCAAGTGCACCAAACTCTTCTTCTACTGTTGAA 300
||||||||||||||||||.||||||.|||||.|||||.||||||||||||
BSU35340___fl 251 TAACTGCTACAGGAAGCGTAAGTGCGCCAAATTCTTCGTCTACTGTTGAA 300
BSNT_05377___ 301 GTGGCGAGCTTGGCAACCGCAGCAACGTATAAGGCAAACAATTATACGGG 350
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU35340___fl 301 GTGGCGAGCTTGGCAACTGCAGCAACGTATAAGGCAAACAATTATACGGG 350
BSNT_05377___ 351 ATACACTCAAGGCGATTACAATTTGGCATTTAACGTTGTTGCGCCTGGCG 400
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 351 ATACACACAAGGCGATTACAATTTGGCATTTAACGTTGTTGCGCCTGGCG 400
BSNT_05377___ 401 AAACAACGGCAAAAACAGTGAACATTAGTGTGACGAGCGCCGATACGATT 450
|||||||.|||||||||||||||||||||||||||||.||||||||||||
BSU35340___fl 401 AAACAACAGCAAAAACAGTGAACATTAGTGTGACGAGTGCCGATACGATT 450
BSNT_05377___ 451 GATAATGTGATTTCTAAACTTAACAGCTCAGATCTAGGAGTATCAGCTTT 500
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU35340___fl 451 GATAATGTGATTTCTAAACTTAACAGCTCAGATCTAGGAGTATCAGCATT 500
BSNT_05377___ 501 TAAAGATAAAATTTGGAATGGTACAGAGTACGTAGAAACAATTGCGTTTT 550
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35340___fl 501 TAAAGATAAAATTTGGAATGGTACAGAGTACGTAGAAACGATTGCGTTTT 550
BSNT_05377___ 551 CTTCTAAAGCAACAGGTGCAGGGGGCAGTATACAGGCAGCAGACTCTGCT 600
||||||||||||||||||||||.||.||.|||||||||||||||||||||
BSU35340___fl 551 CTTCTAAAGCAACAGGTGCAGGAGGAAGCATACAGGCAGCAGACTCTGCT 600
BSNT_05377___ 601 ACAGCTGACTTTATGTCCGGTCAGCTTGGTTTTTCTTTGGATGCTGATAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 601 ACAGCTGACTTTATGTCCGGTCAGCTTGGTTTTTCTTTGGATGCTGATAA 650
BSNT_05377___ 651 TAAGCTCACTGCTTACAAAGAAGGCACAAATGCCAAAGTTACAATCAACG 700
||||||.||||||||||||||||||||||||||||||||.||||||||||
BSU35340___fl 651 TAAGCTTACTGCTTACAAAGAAGGCACAAATGCCAAAGTCACAATCAACG 700
BSNT_05377___ 701 GCTTTGAAATGGAGAAGCTGACAAACAATTTCACGGTGAATGGTGTTACT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 701 GCTTTGAAATGGAGAAGCTGACAAACAATTTCACGGTGAATGGTGTTACT 750
BSNT_05377___ 751 TACTCGATTAAAAATACAACTGCAGCCACAGGCCCTGTTACCACATCTGT 800
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 751 TATTCGATTAAAAATACAACTGCAGCCACAGGCCCTGTTACCACATCTGT 800
BSNT_05377___ 801 TTCTACTGATGTTGACGGAATTTATAACCAAATCAAAGAGTTTGTAGATA 850
|||||||||||||||.||.|||||||||||||||||||||||||||||||
BSU35340___fl 801 TTCTACTGATGTTGATGGGATTTATAACCAAATCAAAGAGTTTGTAGATA 850
BSNT_05377___ 851 AATACAATGAAATGGTTGACAGCCTGAATGAAAAGCTGAAAGAAGAAAAA 900
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU35340___fl 851 AATACAATGAACTGGTTGACAGCCTGAATGAAAAGCTGAAAGAAGAAAAA 900
BSNT_05377___ 901 TACCGAGACTATACTCCGTTGACAAGTGAACAAAAAGAAGCCATGTCCGA 950
||||||||||||||.||..|.||.||||||||||||||||||||||||||
BSU35340___fl 901 TACCGAGACTATACGCCACTCACGAGTGAACAAAAAGAAGCCATGTCCGA 950
BSNT_05377___ 951 TAAAGAGGTAGAGCTCTGGGAGGAGAAGGCGAAAAGCGGATTGCTTAGAA 1000
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU35340___fl 951 TAAAGAGGTAGAGCTCTGGGAGGAGAAGGCGAAAAGCGGATTGCTGAGAA 1000
BSNT_05377___ 1001 ATGATTCTAGCATCAGCACCGGCACAAACCAAATGCGGACTGACTTTTAT 1050
|.|||||.|||||||||||.|||||.||||||||||||||||||||||||
BSU35340___fl 1001 ACGATTCAAGCATCAGCACTGGCACGAACCAAATGCGGACTGACTTTTAT 1050
BSNT_05377___ 1051 ACTCAAGTTAATGCGGATGGGAAAACCTATCAATTGACAGAATTCGGCAT 1100
||||||||.||||||||||||||||||||||||||.||.|||||.|||||
BSU35340___fl 1051 ACTCAAGTGAATGCGGATGGGAAAACCTATCAATTAACTGAATTTGGCAT 1100
BSNT_05377___ 1101 AACAACCTCAAGTGCTTACCAAATGCGGGGGCATTTAGAGATTAATGAAG 1150
.|||||.|||||||||||||||.||||.|||||.|||||||||||.||||
BSU35340___fl 1101 CACAACTTCAAGTGCTTACCAACTGCGAGGGCACTTAGAGATTAACGAAG 1150
BSNT_05377___ 1151 ACAAACTGAAAGCCAAAATACAAGAAGATCCGCAAAGCGTTGCCGCTTTA 1200
|.|||.|||||||.||||||..|||||||||.|||.|.|||||...|.|.
BSU35340___fl 1151 AGAAATTGAAAGCAAAAATAGCAGAAGATCCTCAAGGAGTTGCTAATCTT 1200
BSNT_05377___ 1201 TTTACAAGTGGGTCGAACA----GCAGCGCCTATAGTGATAAAGGGATTA 1246
|||||||||| ||||| ..||...||||||.||||||||.||||
BSU35340___fl 1201 TTTACAAGTG----GAACAAATGATAGTAACTATAGCGATAAAGGTATTA 1246
BSNT_05377___ 1247 TGAAACGCATCGGTGACACCCTGAAAAGTACGGTGAAGAGCATTGAAGCA 1296
||||.||.||...|.|.||.||.|.||||||.|||||.||.||||||||.
BSU35340___fl 1247 TGAAGCGGATTACTAATACACTTAGAAGTACTGTGAAAAGTATTGAAGCT 1296
BSNT_05377___ 1297 AAAGCCGGCAACTCGACAATGGGAACCAATGATTATTCAATCGGTAAAAA 1346
|||||.||.|||||||||||||||.|.|.|...|||||.||.||.|||||
BSU35340___fl 1297 AAAGCTGGGAACTCGACAATGGGAGCTAGTAGCTATTCCATTGGAAAAAA 1346
BSNT_05377___ 1347 TTTAAATACGATCAGCACTGATATTACCAAAATGCAGGACCGGTTAACCA 1396
||||||..||||.||.|||||.||.||..|.|||||||||.|.||.|..|
BSU35340___fl 1347 TTTAAACTCGATAAGTACTGAAATAACTGATATGCAGGACAGATTGAATA 1396
BSNT_05377___ 1397 CAATAGAAAACCGCTATTATTCAAAATTCAGTGCAATGGATTCTGCGATT 1446
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 1397 CCATAGAAAACCGCTATTATTCAAAATTCAGTGCAATGGATTCTGCGATT 1446
BSNT_05377___ 1447 CAAAAAATGAACGAACAAGCGTCCTATTTATCACAGCTTCTTGTACAATA 1496
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35340___fl 1447 CAAAAAATGAACGAACAAGCGTCCTATTTATCACAGCTTCTTGTACAATA 1496
BSNT_05377___ 1497 A 1497
|
BSU35340___fl 1497 A 1497
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