Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05374 and BSU35320
See
Amino acid alignment /
Visit
BSNT_05374 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05374___fliT.1.22522.seq
# -bsequence dna-align/BSU35320___fliT.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05374___fliT-BSU35320___fliT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05374___fliT-BSU35320___fliT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05374___fliT
# 2: BSU35320___fliT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity: 330/342 (96.5%)
# Similarity: 330/342 (96.5%)
# Gaps: 0/342 ( 0.0%)
# Score: 1602.0
#
#
#=======================================
BSNT_05374___ 1 ATGAATAACATAGATCAACTATACACTGAGACGAAGAGTATGCTGTCACA 50
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU35320___fl 1 ATGAATAATATAGATCAACTATACACTGAGACGAAGAGTATGCTGTCACA 50
BSNT_05374___ 51 CATACAAAATACGCCGGAAAGCGATGAGCTTTTAAAACAAATTGAAGACT 100
|||||||||||||||||||||||||||.||||||||.|||||||||||||
BSU35320___fl 51 CATACAAAATACGCCGGAAAGCGATGAACTTTTAAAGCAAATTGAAGACT 100
BSNT_05374___ 101 TTGTGGCTAAACGGTCTGAACTGATTCAGGAGATATCTCTGCCGCTTTCA 150
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU35320___fl 101 TTGTGGCTACACGGTCTGAACTGATTCAGGAGATATCTCTGCCGCTTTCA 150
BSNT_05374___ 151 GAAGAAGAGCGAAAGCAGATGAAGCTAGTGCTGACATGGGATCAGCTTAT 200
|||||||||||||||||||||||.||..|..||||||||||||||||.||
BSU35320___fl 151 GAAGAAGAGCGAAAGCAGATGAAACTTATTTTGACATGGGATCAGCTGAT 200
BSNT_05374___ 201 TGTGAAGGAAATGGAACGACTGAAGCAGTCAATCGCAGCAGAACTTCAGC 250
||||||||||||||||.||||||||||||||||||||.||||||||||||
BSU35320___fl 201 TGTGAAGGAAATGGAAAGACTGAAGCAGTCAATCGCAACAGAACTTCAGC 250
BSNT_05374___ 251 AGATGAAAAGAAAACGTGTGATGCATACGACGTATTTAAACCCTTATAAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35320___fl 251 AGATGAAAAGAAAACGTGTGATGCATACGACGTATTTAAACCCTTATAAC 300
BSNT_05374___ 301 AACATTACGATTGACGGCACATATTATGACAAGCGTAAATAG 342
||||||||||||||||||||||||||||||||||||||||||
BSU35320___fl 301 AACATTACGATTGACGGCACATATTATGACAAGCGTAAATAG 342
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.