Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05369 and BSU35290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence dna-align/BSNT_05369.1.22522.seq
# -bsequence dna-align/BSU35290___prfB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05369-BSU35290___prfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05369-BSU35290___prfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05369
# 2: BSU35290___prfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1102
# Identity: 973/1102 (88.3%)
# Similarity: 973/1102 (88.3%)
# Gaps: 118/1102 (10.7%)
# Score: 4821.0
#
#
#=======================================
BSNT_05369 0 -------------------------------------------------- 0
BSU35290___pr 1 ATGGAATTATCAGAAATTAGAGCAGAGCTCGAAAATATGGCTTCTCGTTT 50
BSNT_05369 0 -------------------------------------------------- 0
BSU35290___pr 51 AGCGGACTTTAGGGGGTCTCTTTGACCTCGAATCAAAGGAGGCCCGCATT 100
BSNT_05369 1 ------------------ATGGCTGATCCGGAATTCTGGAATGATCAGCA 32
||||||||||||||||||||||||||||||||
BSU35290___pr 101 GCTGAGCTAGATGAACAAATGGCTGATCCGGAATTCTGGAATGATCAGCA 150
BSNT_05369 33 AAAAGCTCAAACGGTTATAAATGAAGCAAACGGTTTAAAGGATTATGTCA 82
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 151 AAAAGCTCAAACGGTTATAAATGAAGCAAACGGTTTAAAGGATTATGTCA 200
BSNT_05369 83 ATTCGTATAAAAAATTGAATGAATCCCACGAAGAATTACAAATGACTCAT 132
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 201 ATTCGTATAAAAAATTGAATGAATCCCACGAAGAATTACAAATGACTCAT 250
BSNT_05369 133 GATCTTTTGAAAGAAGAGCCGGACACTGATCTCCAGCTTGAGCTTGAAAA 182
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 251 GATCTTTTGAAAGAAGAGCCGGACACTGATCTCCAGCTTGAGCTTGAAAA 300
BSNT_05369 183 AGAACTAAAATCATTAACAAAAGACTTCAATGAGTTTGAGCTTCAGCTTC 232
|||||||||.||||||||||||||.|||||||||||||||||||||||||
BSU35290___pr 301 AGAACTAAAGTCATTAACAAAAGAGTTCAATGAGTTTGAGCTTCAGCTTC 350
BSNT_05369 233 TTCTCAGCGAGCCGTATGATAAAAATAACGCGATTTTAGAACTGCACCCT 282
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 351 TTCTCAGCGAGCCGTATGATAAAAATAACGCGATTTTAGAACTGCACCCT 400
BSNT_05369 283 GGTGCTGGCGGTACAGAGTCACAGGACTGGGGCTCTATGCTTCTTAGAAT 332
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 401 GGTGCTGGCGGTACAGAGTCACAGGACTGGGGCTCTATGCTTCTTAGAAT 450
BSNT_05369 333 GTATACAAGATGGGGAGAGCGCCGCGGCTTTAAAGTAGAAACACTCGATT 382
|||||||||||||||||||||||||||||||||||||||.||.|||||||
BSU35290___pr 451 GTATACAAGATGGGGAGAGCGCCGCGGCTTTAAAGTAGAGACTCTCGATT 500
BSNT_05369 383 ACCTTCCAGGTGACGAGGCTGGAATCAAGTCAGTGACATTGCTCATCAAA 432
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU35290___pr 501 ACCTTCCAGGTGACGAGGCGGGAATCAAGTCAGTGACATTGCTCATCAAA 550
BSNT_05369 433 GGACATAACGCTTACGGGTATCTCAAAGCAGAAAAAGGTGTCCATCGTCT 482
|||||.|||||||||||||||||||||||||||||||||||.||||||||
BSU35290___pr 551 GGACACAACGCTTACGGGTATCTCAAAGCAGAAAAAGGTGTTCATCGTCT 600
BSNT_05369 483 TGTGCGGATCTCACCATTTGATTCATCAGGCCGCCGCCACACATCTTTCG 532
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 601 TGTGCGGATCTCACCATTTGATTCATCAGGCCGCCGCCACACATCTTTCG 650
BSNT_05369 533 TTTCATGTGAAGTCATGCCTGAATTTAACGATGAAATTGATATTGATATT 582
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 651 TTTCATGTGAAGTCATGCCTGAATTTAACGATGAAATTGATATTGATATT 700
BSNT_05369 583 CGTGCGGAGGATATTAAAGTTGACACGTACCGTGCAAGCGGCGCGGGCGG 632
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 701 CGTACGGAGGATATTAAAGTTGACACGTACCGTGCAAGCGGCGCGGGCGG 750
BSNT_05369 633 ACAGCACGTCAATACGACGGATTCAGCCGTTCGGATTACTCACTTGCCGA 682
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 751 ACAGCACGTCAATACGACGGATTCAGCCGTTCGGATTACTCACTTGCCGA 800
BSNT_05369 683 CGAACGTAGTTGTGACATGCCAAACGGAGCGCTCACAAATTAAAAACCGT 732
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 801 CGAACGTAGTTGTGACATGCCAAACGGAGCGCTCACAAATTAAAAACCGT 850
BSNT_05369 733 GAAAGAGCCATGAAAATGCTGAAGGCCAAGCTGTATCAGCGCAGAATTGA 782
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 851 GAAAGAGCCATGAAAATGCTGAAGGCCAAGCTGTATCAGCGCAGAATTGA 900
BSNT_05369 783 AGAGCAGCAGGCTGAACTGGATGAAATTCGTGGTGAACAAAAAGAAATCG 832
||||||||||||.||.||||||||||||||.|||||||||||||||||||
BSU35290___pr 901 AGAGCAGCAGGCAGAGCTGGATGAAATTCGCGGTGAACAAAAAGAAATCG 950
BSNT_05369 833 GCTGGGGCAGCCAAATCCGTTCTTATGTATTCCATCCGTATTCCATGGTA 882
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 951 GCTGGGGCAGCCAAATCCGTTCTTATGTATTCCATCCGTATTCCATGGTA 1000
BSNT_05369 883 AAAGACCATCGGACCAATACAGAAATGGGGAACGTTCAAGCTGTAATGGA 932
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 1001 AAAGACCATCGGACCAATACAGAAATGGGGAACGTTCAAGCTGTAATGGA 1050
BSNT_05369 933 TGGTGACATTGATACGTTTATTGATGCCTACCTGCGTTCTAAGCTTTCAT 982
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr 1051 TGGTGACATTGATACGTTTATTGATGCCTACCTGCGTTCTAAGCTTTCAT 1100
BSNT_05369 983 AA 984
||
BSU35290___pr 1101 AA 1102
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