Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_05368 and BSU35280

See Amino acid alignment / Visit BSNT_05368 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence dna-align/BSNT_05368___yvjA.1.22522.seq
#    -bsequence dna-align/BSU35280___yvjA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05368___yvjA-BSU35280___yvjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05368___yvjA-BSU35280___yvjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05368___yvjA
# 2: BSU35280___yvjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 849
# Identity:     833/849 (98.1%)
# Similarity:   833/849 (98.1%)
# Gaps:           3/849 ( 0.4%)
# Score: 4113.0
# 
#
#=======================================

BSNT_05368___      1 ATGATGGACGTACGGAATAAAACATTGTGGATTTTGCGGGATTATGTATA     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv      1 ---ATGGACGTACGGAATAAAACATTGTGGATTTTGCGGGATTATGTATA     47

BSNT_05368___     51 CATATTAGTAGGAGCAGCGATTACGGCCGTGTCCTTTAATGTATTTTTGC    100
                     ||||||..||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv     48 CATATTGATAGGAGCAGCGATTACGGCCGTGTCCTTTAATGTATTTTTGC     97

BSNT_05368___    101 TTCCGAACAAGATTGCCGCCGGCGGTGTCAGCGGGATCAGTACGATTTTA    150
                     |||||||.|||||||||||||||||.||||||||||||||||||||||||
BSU35280___yv     98 TTCCGAATAAGATTGCCGCCGGCGGGGTCAGCGGGATCAGTACGATTTTA    147

BSNT_05368___    151 CAATCATATGGTTTTGAAGCAGCGTATGTACAGTGGATTATTAATATCCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    148 CAATCATATGGTTTTGAAGCAGCGTATGTACAGTGGATTATTAATATCCC    197

BSNT_05368___    201 TTTATTTATTGCTGGCGTCATTTTGCTCGGCGGGAAATTTGGGCTAAAGA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU35280___yv    198 TTTATTTATTGCTGGCGTCATTTTGCTCGGCGGGAAATTTGGACTAAAGA    247

BSNT_05368___    251 CGCTTGCTGGTTCTGTGTTTTTGCCGCTAGTTGTGTTTTTGACAAGGGAT    300
                     |||||||.|||||||||||||||||||||||.||||||.|||||||||||
BSU35280___yv    248 CGCTTGCAGGTTCTGTGTTTTTGCCGCTAGTAGTGTTTCTGACAAGGGAT    297

BSNT_05368___    301 ATTCAGCCCGCCACTCATCATGAACTCTTGGCGGCGATTTTTGGCGGTGT    350
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU35280___yv    298 ATTCAGCCCGCCACTCATCATGAACTCCTGGCGGCGATTTTTGGCGGTGT    347

BSNT_05368___    351 CGGGATAGGTATCGGAATTGGTATTGTGTACTTAGGGAAAGGTTCGACGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    348 CGGGATAGGTATCGGAATTGGTATTGTGTACTTAGGGAAAGGTTCGACGG    397

BSNT_05368___    401 GAGGAACAGCCTTGGCTGCACAGATCATTCATAAGTACTCCGGTCTGTCA    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    398 GAGGTACAGCCTTGGCTGCACAGATCATTCATAAGTACTCCGGTCTGTCA    447

BSNT_05368___    451 TTGGGGAAGTGTCTCGCCATCATTGACGGAATGATCGTTGTTACGGCTAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    448 TTGGGGAAGTGTCTCGCCATCATTGACGGAATGATCGTTGTTACGGCTAT    497

BSNT_05368___    501 GATTGTATTTAATATTGAGCAAGGCTTATATGCCATGCTTGGCGTCTATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    498 GATTGTATTTAATATTGAGCAAGGCTTATATGCCATGCTTGGCGTCTATG    547

BSNT_05368___    551 TGTCCAGCAAAACCATTGATGTTGTGCAAGTCGGCTTTAATCGTTCAAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    548 TGTCCAGCAAAACCATTGATGTTGTGCAAGTCGGCTTTAATCGTTCAAAA    597

BSNT_05368___    601 ATGGCGCTCATCATTACAAAGCAGGAGCAGGCTGTCAAGGAGGCTGTCTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    598 ATGGCGCTCATCATTACAAAGCAGGAGCAGGCTGTCAAGGAGGCTGTCTT    647

BSNT_05368___    651 ACAGAAGATTGACAGAGGCGTGACAAAAATCTCTGCAGTCGGCGGATATA    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU35280___yv    648 ACAGAAGATTGACAGAGGCGTGACAAAAATTTCTGCAGTCGGCGGATATA    697

BSNT_05368___    701 CTGATGATGACCGTCCGATTTTAATGTGCGTGGTTGGGCAAACTGAATTC    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    698 CTGACGATGACCGTCCGATTTTAATGTGCGTGGTTGGGCAAACTGAATTC    747

BSNT_05368___    751 ACCAAATTGAAACAAATCGTCAAACAGATTGATGAGTCAGCTTTTGTGAT    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU35280___yv    748 ACCAAATTGAAACAAATCGTCAAACAGATTGATGAGTCAGCTTTTGTAAT    797

BSNT_05368___    801 TGTAGCAGACGCGAGCGAGGTGCTGGGCGAGGGTTTCAAACGCGCTTAA    849
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU35280___yv    798 TGTAGCAGACGCGAGCGAGGTGCTGGGCGAGGGTTTCAAACGCGCTTAA    846


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05368 and BSU35280

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
