Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05356 and BSU35200

See Amino acid alignment / Visit BSNT_05356 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence dna-align/BSNT_05356___yvkB.1.22522.seq
#    -bsequence dna-align/BSU35200___yvkB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05356___yvkB-BSU35200___yvkB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05356___yvkB-BSU35200___yvkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05356___yvkB
# 2: BSU35200___yvkB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity:     566/570 (99.3%)
# Similarity:   566/570 (99.3%)
# Gaps:           0/570 ( 0.0%)
# Score: 2814.0
# 
#
#=======================================

BSNT_05356___      1 TTGAGACCGACAAACAAGAGAATCCTTGATGCTGCCATGCAGCTGCTCGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv      1 TTGAGACCGACAAACAAGAGAATCCTTGATGCTGCCATGCAGCTGCTCGT     50

BSNT_05356___     51 CAAAAAAGGATATCGCGCAACAACTACAAAAGAAATTGCAGAAAAAGCAA    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU35200___yv     51 CAAAAAAGGATATCGCGCAACGACTACAAAAGAAATTGCAGAAAAAGCAA    100

BSNT_05356___    101 ATGTAAGTGAAGCGACGATTTTCAGGAACTTTAAAAACAAACAAGGACTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv    101 ATGTAAGTGAAGCGACGATTTTCAGGAACTTTAAAAACAAACAAGGACTA    150

BSNT_05356___    151 GTTGAGGCTTTGCTTTCTCAGCATTCTTCAAACAGAGGCAGCATTTTGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv    151 GTTGAGGCTTTGCTTTCTCAGCATTCTTCAAACAGAGGCAGCATTTTGGA    200

BSNT_05356___    201 ACAAACAGAAGGGGATTTGTACAAAGACCTGCTTCATATCGGAACCTGTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv    201 ACAAACAGAAGGGGATTTGTACAAAGACCTGCTTCATATCGGAACCTGTC    250

BSNT_05356___    251 TCTTGGAGGAGCTCGAACATAGAAAAGATATCATTAAAATCAGCTTTCGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv    251 TCTTGGAGGAGCTCGAACATAGAAAAGATATCATTAAAATCAGCTTTCGT    300

BSNT_05356___    301 GAACCGGCCATGTTTCAGGATGTCATTAACCACGTCACTGAATATCCCCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv    301 GAACCGGCCATGTTTCAGGATGTCATTAACCACGTCACTGAATATCCCCA    350

BSNT_05356___    351 ATCTATGAAACAGCTATTGGTTGATTATCTCAAAACAATGGGTGAGAAAG    400
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU35200___yv    351 ATCTATGAAACAGCTATTGGTTGATTATCTCAAAACGATGGGTGAGAAAG    400

BSNT_05356___    401 GGGTTATTCAGACAGGAAATGAAGCGGAGCATGCCGACGTGTTCATGTCG    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU35200___yv    401 GGGTTATTCAGACAGGAAATGAAGCGGAACATGCCGACGTGTTCATGTCG    450

BSNT_05356___    451 ATTATCTTCGGTTATTTCATTCACCGTCTCCACTTAGGAGACCGGGTCAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35200___yv    451 ATTATCTTCGGTTATTTCATTCACCGTCTCCACTTAGGAGACCGGGTCAT    500

BSNT_05356___    501 ATCAATGCCCCAGGAAAAAATGCTGGAGCACAGCACAGCTCTATTTGTCA    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU35200___yv    501 ATCAATGCCCCAGGAAAAAATGCTGGAGCATAGCACAGCTCTATTTGTCA    550

BSNT_05356___    551 AAGGAATTTCTGCTGATTAA    570
                     ||||||||||||||||||||
BSU35200___yv    551 AAGGAATTTCTGCTGATTAA    570


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