Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05343 and BSU35130

See Amino acid alignment / Visit BSNT_05343 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence dna-align/BSNT_05343___yvlA.1.22522.seq
#    -bsequence dna-align/BSU35130___yvlA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05343___yvlA-BSU35130___yvlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05343___yvlA-BSU35130___yvlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05343___yvlA
# 2: BSU35130___yvlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     322/327 (98.5%)
# Similarity:   322/327 (98.5%)
# Gaps:           0/327 ( 0.0%)
# Score: 1590.0
# 
#
#=======================================

BSNT_05343___      1 TTGAACCGTAATCAAGCTATTATTGCATCACTTTGTTATTTCAGTGTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35130___yv      1 TTGAACCGTAATCAAGCTATTATTGCATCACTTTGTTATTTCAGTGTGTT     50

BSNT_05343___     51 CATTGCGCCAATCATTGTGCCGATTGTCGCTTATTTTGTTGTAAATGAGA    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU35130___yv     51 CATTGCGCCAATCATTGTGCCGATTGTCGCATATTTTGTTGTAAATGAGA    100

BSNT_05343___    101 AAGAAACAAAACGCCATGCGATACGCTCCCTTATTTCTCACATAGTTCCG    150
                     ||||||||||||||||||||||||||||.||||||||||||||.||||||
BSU35130___yv    101 AAGAAACAAAACGCCATGCGATACGCTCTCTTATTTCTCACATTGTTCCG    150

BSNT_05343___    151 TTTGTCGGCTGGCTGTTCCTTTTTATTGCTTTACTTGGCGGAGCCGTTGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35130___yv    151 TTTGTCGGCTGGCTGTTCCTTTTTATTGCTTTACTTGGCGGAGCCGTTGC    200

BSNT_05343___    201 GATTGATGGAGACAGCTTGCTTCCTGTATTTGTAATCATTGGGGGAGCGG    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35130___yv    201 GATTGATGGAGACAGCTTGCTTCCTGTATTTGTAATCATCGGGGGAGCGG    250

BSNT_05343___    251 TTATTTATTTCTTGGTTGTCATTGGCATTATCATTTGGAATGTGATTCAG    300
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU35130___yv    251 TTATTTATTTCTTAGTTGTCATTGGCATTATCATTTGGAATGTGATTCAG    300

BSNT_05343___    301 GGCATTAAGGTCCTGCGTGCAGCATAA    327
                     |||||||||||||||||||||||||||
BSU35130___yv    301 GGCATTAAGGTCCTGCGTGCAGCATAA    327


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