Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05315 and BSU34940

See Amino acid alignment / Visit BSNT_05315 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_05315___yvpB.1.22522.seq
#    -bsequence dna-align/BSU34940___yvpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05315___yvpB-BSU34940___yvpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05315___yvpB-BSU34940___yvpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05315___yvpB
# 2: BSU34940___yvpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     749/753 (99.5%)
# Similarity:   749/753 (99.5%)
# Gaps:           0/753 ( 0.0%)
# Score: 3729.0
# 
#
#=======================================

BSNT_05315___      1 ATGAAAACACTGCGAACTCTATGTGTCCTGATGATTCTTTCAGGCGTTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv      1 ATGAAAACACTGCGAACTCTATGTGTCCTGATGATTCTTTCAGGCGTTAT     50

BSNT_05315___     51 TTTTTTCGGACTTAAAATAGATGCAAAAGATATAGATATTCCTTTTTTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv     51 TTTTTTCGGACTTAAAATAGATGCAAAAGATATAGATATTCCTTTTTTGA    100

BSNT_05315___    101 ACAGCCTTAAAAAAGTGGTTTCTGATAGCGATACAGACTCAGCTGCGAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    101 ACAGCCTTAAAAAAGTGGTTTCTGATAGCGATACAGACTCAGCTGCGAAT    150

BSNT_05315___    151 AGCAAAAAGGAGCTGAAGGGAAGCGCAAAACCGCTGGATGTCATCCTTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    151 AGCAAAAAGGAGCTGAAGGGAAGCGCAAAACCGCTGGATGTCATCCTTTA    200

BSNT_05315___    201 CAATCAAATGGACGCACCCCGGCTCTATAACGGCTGTGAAGTAACAAGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    201 CAATCAAATGGACGCACCCCGGCTCTATAACGGCTGTGAAGTAACAAGCC    250

BSNT_05315___    251 TTGCGATGGTGCTGAATTACGCGGGATACGACGTGACAAAAAACACTCTG    300
                     |||||||||||||||||||.|||||||||||||||||||||||.||.|||
BSU34940___yv    251 TTGCGATGGTGCTGAATTATGCGGGATACGACGTGACAAAAAATACCCTG    300

BSNT_05315___    301 GCAAATCAGATTGCCACAGTGCCTTTGACATACAGCAGCGGATTAAAGGG    350
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    301 GCAAATCAGGTTGCCACAGTGCCTTTGACATACAGCAGCGGATTAAAGGG    350

BSNT_05315___    351 TGATCCGAATGACGGATTTGTCGGGGATATGGCGAATGGCCCTGGTCTCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    351 TGATCCGAATGACGGATTTGTCGGGGATATGGCGAATGGCCCTGGTCTCG    400

BSNT_05315___    401 GTGTCTACCATCGACCGATCTATCAGCTGGCGAAAACCTATGCGGGAGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    401 GTGTCTACCATCGACCGATCTATCAGCTGGCGAAAACCTATGCGGGAGAC    450

BSNT_05315___    451 AAAGTGTCTGATCTGACTGGAAAAAGTATTTCCGCTGTTTATCAGCAGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    451 AAAGTGTCTGATCTGACTGGAAAAAGTATTTCCGCTGTTTATCAGCAGCT    500

BSNT_05315___    501 TGAAAAAGGCAATCCAGTTTGGGTTATTACGACAGCCAACTTTACGCCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    501 TGAAAAAGGCAATCCAGTTTGGGTTATTACGACAGCCAACTTTACGCCAG    550

BSNT_05315___    551 TTGACAACATGCAGACATGGAAAACGCCAAACGGAACGATAGAAATTACG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    551 TTGACAACATGCAGACATGGAAAACGCCAAACGGAACGATAGAAATTACG    600

BSNT_05315___    601 TACAGCGAACACAGCGTCGCCGTTACGGGATATGATGATAAATATGTGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    601 TACAGCGAACACAGCGTCGCCGTTACGGGATATGATGATAAATATGTGTA    650

BSNT_05315___    651 TCTCAATGATCCGTATGGCTATAAAAACAGAAAAACCGATAGAACAAGCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    651 TCTCAATGATCCGTATGGCTATAAAAACAGAAAAACCGATAGAACAAGCT    700

BSNT_05315___    701 TTGAAAAAGCGTGGAAACAAATGGGCAGCCAGGCCGTGGTTATTCAAAAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    701 TTGAAAAAGCGTGGAAACAAATGGGCAGCCAGGCCGTGGTTATTCAAAAG    750

BSNT_05315___    751 TAA    753
                     |||
BSU34940___yv    751 TAA    753


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