Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05311 and BSU34910

See Amino acid alignment / Visit BSNT_05311 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_05311___hisD.1.22522.seq
#    -bsequence dna-align/BSU34910___hisD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05311___hisD-BSU34910___hisD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05311___hisD-BSU34910___hisD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05311___hisD
# 2: BSU34910___hisD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1284
# Identity:    1269/1284 (98.8%)
# Similarity:  1269/1284 (98.8%)
# Gaps:           0/1284 ( 0.0%)
# Score: 6285.0
# 
#
#=======================================

BSNT_05311___      1 ATGAAGATCAAAACCATCAGCGGAGCGGAACGGCTTTCTCTCAAGCGTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi      1 ATGAAGATCAAAACCATCAGCGGAGCGGAACGGCTTTCTCTCAAGCGTTC     50

BSNT_05311___     51 CATCGATGCTGGAACGGAAGAGCAAAGAAAGACGGTCCGGTCCATTATTG    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU34910___hi     51 CATCGATGCCGGAACGGAAGAGCAAAGAAAGACGGTCCGGTCCATTATTG    100

BSNT_05311___    101 AAGATGTTAAAGCAAACGGTGATCAGGCGGTTCGCAGCTACACGGCGAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    101 AAGATGTTAAAGCAAACGGTGATCAGGCGGTTCGCAGCTACACGGCGAAA    150

BSNT_05311___    151 TTTGACGGCATCGAAATAGACAGCCCGCTGGTCACAAAAGAAGAATTTGA    200
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    151 TTTGACTGCATCGAAATAGACAGCCCGCTGGTCACAAAAGAAGAATTTGA    200

BSNT_05311___    201 GGAGGCATACACCTCACTGGATTCACGTCTTCTTCAGGTGATTAGGCAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    201 GGAGGCATACACCTCACTGGATTCACGTCTTCTTCAGGTGATTAGGCAGG    250

BSNT_05311___    251 CAATCGAAAATATTAGGGAATATCACGAAAGACAGCTGCAATCCTCCTGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    251 CAATCGAAAATATTAGGGAATATCACGAAAGACAGCTGCAATCCTCCTGG    300

BSNT_05311___    301 TTTTATCACAGAAAGGACGGCACAATGCTGGGGCAGAAAGTGACGGCGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    301 TTTTATCACAGAAAGGACGGCACAATGCTGGGGCAGAAAGTGACGGCGCT    350

BSNT_05311___    351 GGATTCCGCCGGTGTATATGTGCCGGGGGGAACGGCCGCATATCCTTCAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    351 GGATTCCGCCGGTGTATATGTGCCGGGGGGAACGGCCGCATATCCTTCAT    400

BSNT_05311___    401 CTGTTTTGATGAATGTGATTCCGGCGCTTGTAGCGGGCGTTGAAAGAATC    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU34910___hi    401 CTGTTTTGATGAATGTGATTCCGGCGCTCGTAGCGGGCGTTGAAAGAATC    450

BSNT_05311___    451 GTTCTCGTCACGCCTCCGGGAAAAGACGGTCTGCTGTCTCCTGGAGTTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    451 GTTCTCGTCACGCCTCCGGGAAAAGACGGTCTGCTGTCTCCTGGAGTTTT    500

BSNT_05311___    501 GGTTGCTGCAGCCGAGCTGGGCATAAAAGACATTTACAAAATGGGCGGCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    501 GGTTGCTGCAGCCGAGCTGGGCATAAAAGACATTTACAAAATGGGCGGCG    550

BSNT_05311___    551 CTCAGGCGATTGCGGCGTTAGCATACGGAACAGAAACCATTGAACCGGTG    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU34910___hi    551 CTCAGGCGATTGCGGCGTTAGCATACGGAACAGAAACCATTGAGCCGGTG    600

BSNT_05311___    601 GATAAAATCACGGGTCCGGGCAACATTTATGTCGCACTTGCCAAACGGGA    650
                     |||||||||||||||||||||||||||||||||||.|||||||||||.||
BSU34910___hi    601 GATAAAATCACGGGTCCGGGCAACATTTATGTCGCGCTTGCCAAACGAGA    650

BSNT_05311___    651 AGTGTTCGGCGATGTCGATATCGATATGATTGCCGGACCTAGTGAAATCG    700
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34910___hi    651 AGTGTTCGGCGATGTCGATATCGATATGATTGCCGGACCGAGTGAAATCG    700

BSNT_05311___    701 TCGTGCTGGCTGATGAAACAGCGATTCCGAGCGAAATTGCAGCCGATCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    701 TCGTGCTGGCTGATGAAACAGCGATTCCGAGCGAAATTGCAGCCGATCTG    750

BSNT_05311___    751 CTGTCACAGGCGGAACACGATAAGCTCAGCTCATGTGTGTTTGTCACAGA    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34910___hi    751 CTGTCACAGGCGGAACACGATAAGCTTAGCTCATGTGTGTTTGTCACAGA    800

BSNT_05311___    801 TTCCATGGCGCTGGCCGAGGCGGTTTCAGCCGAGGTGAGTAAGCAGCTGA    850
                     |||||||||||||||||||.||||||||||||||||||.||||||||||.
BSU34910___hi    801 TTCCATGGCGCTGGCCGAGACGGTTTCAGCCGAGGTGAATAAGCAGCTGG    850

BSNT_05311___    851 AAACCTTGCCGCGAAGAGAAATAGCGGAAGCTTCAGTGAGAGATTACGGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    851 AAACCTTGCCGCGAAGAGAAATAGCGGAAGCTTCAGTGAGAGATTACGGT    900

BSNT_05311___    901 TGTATATATGTGGCGGAAACAATGGTGGAAGCGATTAATACTGTCAATAC    950
                     ||||||||||||||||||||||||||.|||||||||.|.|||||||||||
BSU34910___hi    901 TGTATATATGTGGCGGAAACAATGGTAGAAGCGATTGAGACTGTCAATAC    950

BSNT_05311___    951 ACTCGCGCCAGAGCATTTAGAAATCATAACACAGTCTCCGGAAGCTTTGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi    951 ACTCGCGCCAGAGCATTTAGAAATCATAACACAGTCTCCGGAAGCTTTGC   1000

BSNT_05311___   1001 TTGGCAGTATCAAACATGCGGGTGCAATTTTCTTAGGCAGATACAGCCCT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi   1001 TTGGCAGTATCAAACATGCGGGTGCAATTTTCTTAGGCAGATACAGCCCT   1050

BSNT_05311___   1051 GAGCCTGTCGGTGATTATTTTGCCGGACCGAACCATGTGCTTCCGACAAA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi   1051 GAGCCTGTCGGTGATTATTTTGCCGGACCGAACCATGTGCTTCCGACAAA   1100

BSNT_05311___   1101 CGGAACAGCCAGATTTTCAAGTCCATTAAACGTAACTGATTTTCAAAAGA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi   1101 CGGAACAGCCAGATTTTCAAGTCCATTAAACGTAACTGATTTTCAAAAGA   1150

BSNT_05311___   1151 AATCGAGCATTATTTCTTACAGTCAATCAGCCTTTGAAGAACATGCTGAA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34910___hi   1151 AATCGAGCATTATTTCTTACAGTCAATCAGCCTTTGAAGAACATGCCGAA   1200

BSNT_05311___   1201 AGCATCGCGGCTTTTGCCAGACTGGAAGGGTTAGAAGCCCATGCCAGATC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34910___hi   1201 AGCATCGCGGCTTTTGCCAGACTGGAAGGGTTAGAAGCCCATGCCAGATC   1250

BSNT_05311___   1251 AATTGAAGCGAGAGAACGGAGGATTTCTAAATGA   1284
                     ||||||||||||||||||||||||||||||||||
BSU34910___hi   1251 AATTGAAGCGAGAGAACGGAGGATTTCTAAATGA   1284


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