Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05307 and BSU34880

See Amino acid alignment / Visit BSNT_05307 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence dna-align/BSNT_05307___hisA.1.22522.seq
#    -bsequence dna-align/BSU34880___hisA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05307___hisA-BSU34880___hisA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05307___hisA-BSU34880___hisA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05307___hisA
# 2: BSU34880___hisA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 738
# Identity:     720/738 (97.6%)
# Similarity:   720/738 (97.6%)
# Gaps:           0/738 ( 0.0%)
# Score: 3528.0
# 
#
#=======================================

BSNT_05307___      1 ATGAGTGCTTTTACATTATATCCGGCAATTGATATGAGAAACGGCAAATG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi      1 ATGAGTGCTTTTACATTATATCCGGCAATTGATATGAGAAACGGCAAATG     50

BSNT_05307___     51 TGTCCGCCTTGTTCAAGGGGATTATAATAAGGAAACGATATATGGCGATT    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi     51 TGTTCGCCTTGTTCAAGGGGATTATAATAAGGAAACGATATATGGCGATT    100

BSNT_05307___    101 CACCGTACGACATGGCTGAGTTATTTGCGAAAGAGGGTGCCGAATGGATC    150
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU34880___hi    101 CACCGTACGACATGGCTGAGTTATTTGAGAAAGAGGGTGCCGAATGGATC    150

BSNT_05307___    151 CATCTCGTTGATCTCGACGGGGCCAAAGAAGGGAAAAGGGTAAATGACCG    200
                     ||||||||||||||||||||||||||||||||||||||.||.||||||||
BSU34880___hi    151 CATCTCGTTGATCTCGACGGGGCCAAAGAAGGGAAAAGAGTGAATGACCG    200

BSNT_05307___    201 CCATGTGATTGAGATTGCGCAAAAGCTGAACCTGAAAGTCGAAATCGGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi    201 CCATGTGATTGAGATTGCGCAAAAGCTGAACCTGAAAGTCGAAATCGGCG    250

BSNT_05307___    251 GCGGAATCCGTTCCGAAAAAGACGTCTATGAATATTTATCAGCAGGAGTC    300
                     |.||.||||||||.|||||.||||||||||||||||||||||||||||||
BSU34880___hi    251 GTGGGATCCGTTCTGAAAATGACGTCTATGAATATTTATCAGCAGGAGTC    300

BSNT_05307___    301 GATCGGGTGATCCTGGGAAGCTCAGCAGTTTCTAACCCTCCGTTTGTCAA    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi    301 GAGCGGGTGATCCTGGGAAGCTCAGCAGTTTCTAACCCTCCGTTTGTCAA    350

BSNT_05307___    351 AAAAATGCTGAAACAATATGGCGAGAAAATTGCAATCGGACTGGATGCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi    351 AAAAATGCTGAAACAATATGGCGAGAAAATTGCAATCGGACTGGATGCGA    400

BSNT_05307___    401 GAAACGGTTTTGTTTCAACAGAGGGATGGCTGGAAACATCAACCCTTAAG    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU34880___hi    401 GAAACGGTTTTGTTTCAACAGAGGGATGGCTTGAAACATCAACCCTTAAG    450

BSNT_05307___    451 GCAACTGAACTGGGCAAAGAGCTAGCCAATGAAGGTGCGGAAGTCTTTAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi    451 GCAACTGAACTGGGCAAAGAGCTAGCCAATGAAGGTGCGGAAGTCTTTAT    500

BSNT_05307___    501 TTTTACTGACATCGCGACAGATGGAATGCTGTCAGGCCCAAATGTTAAAA    550
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34880___hi    501 TTTTACTGACATCGCGACAGATGGAATGCTGTCAGGCCCCAATGTTAAAA    550

BSNT_05307___    551 GTACGGTCGAGCTTGCGAAGGAAACGGGGAAATCGGTGATCGCTTCAGGC    600
                     |.||||||||||||||.|||||||||||||||||||||||||||||.|||
BSU34880___hi    551 GCACGGTCGAGCTTGCTAAGGAAACGGGGAAATCGGTGATCGCTTCCGGC    600

BSNT_05307___    601 GGAGTCAGCTCCGTCACGGATCTCGAAGCCCTCGCTCGCTATGAGGCGGA    650
                     |||||||||||||||.|||||||||||||.|||||.|||.||||||||||
BSU34880___hi    601 GGAGTCAGCTCCGTCGCGGATCTCGAAGCTCTCGCCCGCAATGAGGCGGA    650

BSNT_05307___    651 CGGCGTCTCTGGAGCGATCATCGGAAAAGCGCTGTATACCAATCAGTTTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34880___hi    651 CGGCGTCTCTGGAGCGATCATCGGAAAAGCGCTGTATACCAATCAGTTTA    700

BSNT_05307___    701 CGCTGAGTGAGGCGCTTGAAAGGGTGAAGCGCAAATGA    738
                     ||||||||||||||||||||||||||||||||||||||
BSU34880___hi    701 CGCTGAGTGAGGCGCTTGAAAGGGTGAAGCGCAAATGA    738


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