Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05301 and BSU34830

See Amino acid alignment / Visit BSNT_05301 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence dna-align/BSNT_05301___yvzA.1.22522.seq
#    -bsequence dna-align/BSU34830___yvzA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05301___yvzA-BSU34830___yvzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05301___yvzA-BSU34830___yvzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05301___yvzA
# 2: BSU34830___yvzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity:     350/360 (97.2%)
# Similarity:   350/360 (97.2%)
# Gaps:           6/360 ( 1.7%)
# Score: 1721.5
# 
#
#=======================================

BSNT_05301___      1 GTGACTTCCTTATTTTCAGAAAGTGAAACAGAAATTGTATCAACGACCTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34830___yv      1 GTGACTTCCTTATTTTCAGAAAGTGAAACAGAAATTGTATCAACGACCTA     50

BSNT_05301___     51 TATGTTTCTTACCCAAGATGAAATGAAGGGGAAAGCGGGCACCCTCAATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34830___yv     51 TATGTTTCTTACCCAAGATGAAATGAAGGGGAAAGCGGGCACCCTCAATC    100

BSNT_05301___    101 AACCGATCAACGACTTTCTCAGCCTGACAAAGAAATTTGAGTCTTCATTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34830___yv    101 AACCGATCAACGACTTTCTCAGCCTGACAAAGAAATTTGAGTCTTCATTA    150

BSNT_05301___    151 AAAGAGGAAATCAAAGGGCAAAAAGGATTGATTGTAAAAAAAATAAAAAA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34830___yv    151 AAAGAGGAAATCAAAGGGCAAAAAGGGTTGATTGTAAAAAAAATAAAAAA    200

BSNT_05301___    201 AGAGCTTGAGTCTAATAGCGAAAAACGAAAAGCTGCCCTTGAGATGATAA    250
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU34830___yv    201 AGAGCTTGAGTCTAATAGCGAAAAACGAAAAGCTGCCCTTCAGATGATAA    250

BSNT_05301___    251 AAGAAGAACATACCGCAAAAGTTGATCGGTACAAAATGATAATAGAAGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34830___yv    251 AAGAAGAACATACCGCAAAAGTTGATCGGTACAAAATGATAATAGAAGAC    300

BSNT_05301___    301 CTGCGGCAGCAGGATGTAACATTGACTTACAGAAAAAAGAAGCCAGTG--    348
                     |||||.||||||||||||||||||||||||||||||||||||||||||  
BSU34830___yv    301 CTGCGACAGCAGGATGTAACATTGACTTACAGAAAAAAGAAGCCAGTGAA    350

BSNT_05301___    349 ----CTCTAA    354
                         .|||||
BSU34830___yv    351 AGATGTCTAA    360


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