Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05294 and BSU34780

See Amino acid alignment / Visit BSNT_05294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_05294___yvcI.1.22522.seq
#    -bsequence dna-align/BSU34780___yvcI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05294___yvcI-BSU34780___yvcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05294___yvcI-BSU34780___yvcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05294___yvcI
# 2: BSU34780___yvcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     472/477 (99.0%)
# Similarity:   472/477 (99.0%)
# Gaps:           0/477 ( 0.0%)
# Score: 2340.0
# 
#
#=======================================

BSNT_05294___      1 GTGACGTACTTGCAAAGAGTGACAAATTGTGTGCTTCAGACGGATGACAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34780___yv      1 GTGACGTACTTGCAAAGAGTGACAAATTGTGTGCTTCAGACGGATGACAA     50

BSNT_05294___     51 AGTTCTTCTGCTTCAAAAGCCGAGACGCGGCTGGTGGGTCGCGCCGGGCG    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||.|
BSU34780___yv     51 AGTTCTTCTGCTTCAAAAGCCGAGACGCGGATGGTGGGTCGCGCCGGGAG    100

BSNT_05294___    101 GCAAGATGGAGAGCGGAGAATCAGTCAGAGACTCCGTCATCAGAGAGTAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34780___yv    101 GCAAGATGGAGAGCGGAGAATCAGTCAGAGACTCCGTCATCAGAGAGTAC    150

BSNT_05294___    151 AGAGAAGAGACTGGTATCTATATCATAAATCCTCAATTAAAAGGCGTTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34780___yv    151 AGAGAAGAGACTGGTATCTATATCATAAATCCTCAATTAAAAGGCGTTTT    200

BSNT_05294___    201 TACCTTTATTATTAAAGACGGTGACCACATTGTCTCCGAGTGGATGATGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34780___yv    201 TACCTTTATTATTAAAGACGGTGACCACATTGTCTCCGAGTGGATGATGT    250

BSNT_05294___    251 TTACGTTTGTCGCTGATTCATATACAGGACAAAATGTATCAGAATCGGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34780___yv    251 TTACGTTTGTCGCTGATTCATATACAGGACAAAATGTATCAGAATCAGAG    300

BSNT_05294___    301 GAAGGGAAACTGCAGTGGCACGATGTCAATGACATTCAGAACCTGCCTAT    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU34780___yv    301 GAAGGCAAACTGCAGTGGCACGATGTCAATGACATTCAGAACCTGCCTAT    350

BSNT_05294___    351 GGCCCCTGGAGACGGCCATATCCTTGATTTTATGATGAAGGGACAAGGGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34780___yv    351 GGCCCCTGGAGACGGCCATATCCTTGATTTTATGATGAAGGGACAAGGGC    400

BSNT_05294___    401 TGCTGCACGGCACATTTACGTATACACCGGACTTTGAGCTGCTCAGTTAT    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU34780___yv    401 TGCTGCACGGCACATTTACGTATACACCGGAATTTGAGCTGCTCAGTTAT    450

BSNT_05294___    451 CGTTTAGACCCGCAGCACATCAAATAG    477
                     |||||||||||||||||||||||||||
BSU34780___yv    451 CGTTTAGACCCGCAGCACATCAAATAG    477


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