Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05282 and BSU34680

See Amino acid alignment / Visit BSNT_05282 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence dna-align/BSNT_05282___yvcT.1.22522.seq
#    -bsequence dna-align/BSU34680___yvcT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05282___yvcT-BSU34680___yvcT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05282___yvcT-BSU34680___yvcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05282___yvcT
# 2: BSU34680___yvcT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     947/978 (96.8%)
# Similarity:   947/978 (96.8%)
# Gaps:           3/978 ( 0.3%)
# Score: 4623.0
# 
#
#=======================================

BSNT_05282___      1 ---TTGAAACCATTTGTATTTATCACAAAACCGATTCCTGAAGAGATTGA     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU34680___yv      1 TTGTTGAAACCATTTGTATTTATCACAAAACCGATTCCTGAAGAGATTGA     50

BSNT_05282___     48 AGCATTCATCGGAGAACATTGCCGTTATGAAGTATGGCAGGAGGATACGC     97
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34680___yv     51 AGCATTCATCGGTGAACATTGCCGTTATGAAGTATGGCAGGAGGATACGC    100

BSNT_05282___     98 TTCCGAGTGACGTGCTATTTGAAAAATTAAAAGAAGCGGAAGGGCTTTTA    147
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU34680___yv    101 TTCCGAGTGACGTGCTATTTGAAAAATTAAAAGAAGCGGAGGGGCTTTTA    150

BSNT_05282___    148 ACATCAGGGACGTCCGGACCGTCAATCAATCGTGAGTTGCTGGAACACGC    197
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34680___yv    151 ACATCAGGGACGTCCGGACCGTCAATCAATCGTGAGTTGCTGGAACACGC    200

BSNT_05282___    198 TCCTAAGCTCAAAGTGGTCAGCAACCAATCAGTAGGCTACGATAATTTCG    247
                     .||||||||||||||||||||||||||||||||||||||||||||.||||
BSU34680___yv    201 GCCTAAGCTCAAAGTGGTCAGCAACCAATCAGTAGGCTACGATAACTTCG    250

BSNT_05282___    248 ATATAGAAGCAATGAAAGAAAGAGGAGTAATCGGCACTCATACACCTTAT    297
                     ||||||||||||||||||||||||||||..||||.|||||||||||||||
BSU34680___yv    251 ATATAGAAGCAATGAAAGAAAGAGGAGTCGTCGGGACTCATACACCTTAT    300

BSNT_05282___    298 ACACTGGATGACACAGTTGCAGATCTGGCCTTTTCTCTGATTCTATCTTC    347
                     |||||||||||||||||||||||||||||.|||||.||||||||.|||||
BSU34680___yv    301 ACACTGGATGACACAGTTGCAGATCTGGCTTTTTCACTGATTCTGTCTTC    350

BSNT_05282___    348 CGCCAGACGTGTTGCCGAACTTGACCGTTTTGTCAGGGCAGGAAAATGGG    397
                     |||||||||||||||||||||.||||||||||||||.|||||||||||||
BSU34680___yv    351 CGCCAGACGTGTTGCCGAACTGGACCGTTTTGTCAGAGCAGGAAAATGGG    400

BSNT_05282___    398 GGACCGTGGAAGAGGAAGCGCTTTTCGGAATTGATGTTCATCATCAAACA    447
                     |.|||||||||||||||||||||||||||||||||||||||||||||||.
BSU34680___yv    401 GAACCGTGGAAGAGGAAGCGCTTTTCGGAATTGATGTTCATCATCAAACG    450

BSNT_05282___    448 TTAGGCATTATCGGCATGGGCAGAATAGGAGAACAAGCAGCGAGACGCGC    497
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34680___yv    451 TTAGGCATTATCGGCATGGGCAGAATTGGAGAACAAGCAGCGAGACGCGC    500

BSNT_05282___    498 CAAATTTGGTTTTGATATGGAAGTGCTTTATCATAACCGACATCGCAAAC    547
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34680___yv    501 CAAATTTGGTTTTGATATGGAAGTGCTTTATCATAACCGACATCGCAAAC    550

BSNT_05282___    548 AAGAAACAGAAGATAGCATCGGCGTTAAGTATGCAGAGCTTGATACATTG    597
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34680___yv    551 AAGAAACAGAAGACAGCATCGGCGTTAAGTATGCAGAGCTTGATACATTG    600

BSNT_05282___    598 CTGGAGCGATCTGATTTTATTCTTCTCATTACGCCGCTGACTGATGAAAC    647
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU34680___yv    601 CTGGAGCAATCTGATTTTATTCTTCTCATTACGCCGCTGACTGATGAAAC    650

BSNT_05282___    648 CTATCACATGATAGGAGAACGCGAATTTAAGTTGATGAAGGATTCAGCAA    697
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU34680___yv    651 CTATCACATGATAGGAGAACGCGAATTTAAGTTGATGAAGAATTCAGCAA    700

BSNT_05282___    698 TTTTCGTCAATATTTCCCGGGGAAAGACAGTTGATGAGAAAGCACTGATT    747
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU34680___yv    701 TTTTCGTCAATATTTCCCGGGGAAAGACAGTTGATGAAAAAGCACTGATT    750

BSNT_05282___    748 CGCGCTCTTCAGGAAGGCTGGATCAGGGGAGCCGGCCTAGATGTATACGA    797
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU34680___yv    751 CGCGCTCTTCAGGAAGGCTGGATCAGGGGAGCCGGCTTAGATGTATACGA    800

BSNT_05282___    798 AAAAGAGCCTGTCTCCCAAGATAATCCGCTCCTGCAGCTGGATAATGTCA    847
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34680___yv    801 AAAAGAGCCTGTCACCCAAGATAATCCGCTCCTGCAGCTGGATAATGTCA    850

BSNT_05282___    848 CGCTGCTTCCTCATATCGGTTCAGCAACAGCTAAAGTGCGCTTCAACATG    897
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34680___yv    851 CGCTGCTTCCTCATATCGGTTCAGCAACAGCTAAAGTGCGCTTCAACATG    900

BSNT_05282___    898 TGTAAACAGGCTGCCGAAAATATGATCGCAGCCATTCAAGGACAAACACC    947
                     ||.||||||||.||||||||||||.|||||||.||.|||||.||||||||
BSU34680___yv    901 TGCAAACAGGCCGCCGAAAATATGCTCGCAGCGATCCAAGGGCAAACACC    950

BSNT_05282___    948 GAAAAATCTCACAAGAGAATTTCAATAA    975
                     |||||||||.||||||||||||||||||
BSU34680___yv    951 GAAAAATCTTACAAGAGAATTTCAATAA    978


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05282 and BSU34680

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
