Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05276 and BSU34640

See Amino acid alignment / Visit BSNT_05276 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence dna-align/BSNT_05276___yvdD.1.22522.seq
#    -bsequence dna-align/BSU34640___yvdD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05276___yvdD-BSU34640___yvdD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05276___yvdD-BSU34640___yvdD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05276___yvdD
# 2: BSU34640___yvdD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 576
# Identity:     570/576 (99.0%)
# Similarity:   570/576 (99.0%)
# Gaps:           0/576 ( 0.0%)
# Score: 2826.0
# 
#
#=======================================

BSNT_05276___      1 TTGAAAACCATTTGTGTATTTGCGGGATCAAACCCTGGGGGAAATGAAGC     50
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv      1 ATGAAAACCATTTGTGTATTTGCGGGATCAAACCCTGGGGGAAATGAAGC     50

BSNT_05276___     51 GTATAAAAGAAAAGCGGCAGAGCTTGGCGTGTATATGGCTGAGCAGGGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv     51 GTATAAAAGAAAAGCGGCAGAGCTTGGCGTGTATATGGCTGAGCAGGGAA    100

BSNT_05276___    101 TCGGCCTTGTCTATGGGGGCTCCCGCGTCGGCTTGATGGGCACGATTGCC    150
                     ||||||||||||||||||||||||||||.||||||||||||||||||||.
BSU34640___yv    101 TCGGCCTTGTCTATGGGGGCTCCCGCGTAGGCTTGATGGGCACGATTGCT    150

BSNT_05276___    151 GACGCGATTATGGAAAACGGCGGAACTGCAATCGGGGTCATGCCGAGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv    151 GACGCGATTATGGAAAACGGCGGAACTGCAATCGGGGTCATGCCGAGCGG    200

BSNT_05276___    201 TTTGTTCAGCGGGGAGGTTGTCCATCAAAACCTGACTGAGCTGATTGAAG    250
                     |||||||||||||||||||||||||||.||.|||||||||||||||||||
BSU34640___yv    201 TTTGTTCAGCGGGGAGGTTGTCCATCAGAATCTGACTGAGCTGATTGAAG    250

BSNT_05276___    251 TAAACGGGATGCATGAACGAAAGGCTAAAATGAGCGAGCTGGCGGACGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv    251 TAAACGGGATGCATGAACGAAAGGCTAAAATGAGCGAGCTGGCGGACGGC    300

BSNT_05276___    301 TTTATCTCGATGCCGGGCGGCTTCGGTACATATGAAGAATTATTTGAAGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv    301 TTTATCTCGATGCCGGGCGGCTTCGGTACATATGAAGAATTATTTGAAGT    350

BSNT_05276___    351 GCTGTGCTGGGCACAGATCGGCATCCACCAAAAGCCAATCGGACTGTACA    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34640___yv    351 GCTGTGCTGGGCACAGATCGGCATCCACCAAAAGCCAATTGGACTGTACA    400

BSNT_05276___    401 ATGTAAACGGATATTTTGAACCAATGATGAAAATGGTGAAATACAGCATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv    401 ATGTAAACGGATATTTTGAACCAATGATGAAAATGGTGAAATACAGCATT    450

BSNT_05276___    451 CAAGAAGGGTTTTCTAACGAATCGCACCTAAAACTGATTCACAGCTCGTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv    451 CAAGAAGGGTTTTCTAACGAATCGCACCTAAAACTGATTCACAGCTCGTC    500

BSNT_05276___    501 ACGGCCGGATGAGTTAATTGAGCAAATGCAAAATTATTCTTATCCGATTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34640___yv    501 ACGGCCGGATGAGTTAATTGAGCAAATGCAAAATTATTCTTATCCGATTT    550

BSNT_05276___    551 TAGAAAAAAAGTGGACAGAAATTTAA    576
                     ||||||||||||||||||||||||||
BSU34640___yv    551 TAGAAAAAAAGTGGACAGAAATTTAA    576


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