Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05273 and BSU34620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_05273___yvdF.1.22522.seq
# -bsequence dna-align/BSU34620___mdxD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05273___yvdF-BSU34620___mdxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05273___yvdF-BSU34620___mdxD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05273___yvdF
# 2: BSU34620___mdxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1770
# Identity: 1728/1770 (97.6%)
# Similarity: 1728/1770 (97.6%)
# Gaps: 6/1770 ( 0.3%)
# Score: 8485.0
#
#
#=======================================
BSNT_05273___ 1 ---ATGGAATATGCAGCGATTCACCACCAGCCATTCAGCACAGATGCTTA 47
||||||||||||||||||||.||||||||||||||||||||||||||
BSU34620___md 1 ATGATGGAATATGCAGCGATTCATCACCAGCCATTCAGCACAGATGCTTA 50
BSNT_05273___ 48 TTCTTATGATGGGCGGACTGTGCATATCAAGATTCGGACGAAAAAAGGTG 97
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 51 TTCTTATGATGGGCGGACTGTGCATATCAAGATTCGGACGAAAAAAGGTG 100
BSNT_05273___ 98 ATGCAGATCACATTCGATTCATTTGGGGTGATCCCTATGAGTACAACGAC 147
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 101 ATGCAGATCACATTCGATTCATTTGGGGTGATCCCTATGAGTACAACGAC 150
BSNT_05273___ 148 GGCAAATGGTCCGCAAACGAGCAGCCGATGAGAAAAATTGCTGCAACAGA 197
|||||||||||.||||||||||||||||||||.|||||||||||.|||||
BSU34620___md 151 GGCAAATGGTCGGCAAACGAGCAGCCGATGAGGAAAATTGCTGCTACAGA 200
BSNT_05273___ 198 AATGCATGACTATTGGTTTGCTGAAGTGGTGCCGCCATTTAGACGTTTAC 247
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU34620___md 201 AATGCATGACTATTGGTTTGCTGAAGTGGTGCCGCCATTTAGGCGTTTAC 250
BSNT_05273___ 248 AATATGCGTTTGTTGTAACAGACGATCATGAAGATATCTTTTTCGGAAGT 297
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU34620___md 251 AATATGCGTTTGTTGTAACAGACGATCATGAAGACATCTTTTTCGGAAGT 300
BSNT_05273___ 298 TCGGGTGTATGCCCTTATAACGAAAAAACACTGGAAACGATTCATTATTA 347
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 301 TCGGGTGTATGCCCTTATAACGAAAAAACACTGGAAACGATTCATTATTA 350
BSNT_05273___ 348 CTTTAAATTTCCGTTTGTTCACGAGGCTGATACATTTCAAGCGCCTGAAT 397
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 351 CTTTAAATTTCCGTTTGTTCACGAGGCTGATACATTTCAAGCGCCTGAAT 400
BSNT_05273___ 398 GGGTCAAGTCAACGGTTTGGTATCAAATTTTTCCGGAGCGTTTTGCAAAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 401 GGGTCAAGTCAACGGTTTGGTATCAAATTTTTCCGGAGCGTTTTGCAAAT 450
BSNT_05273___ 448 GGAAGAGAAGACTTGTCACCGAAGAATGCATTGCCGTGGGGGAGCAAGGA 497
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 451 GGAAGAGAAGACTTGTCACCGAAGAATGCATTGCCGTGGGGGAGCAAGGA 500
BSNT_05273___ 498 CCCGGGCGTCAATGATTTTTTTGGAGGAGATTTGCAAGGGATTGTTGACA 547
|||||.|||||||||||||||||||||.|||||.|||||.||||||||||
BSU34620___md 501 CCCGGACGTCAATGATTTTTTTGGAGGGGATTTACAAGGAATTGTTGACA 550
BSNT_05273___ 548 AGCTTGATTATTTAGAGGATTTAGGGGTGAACGGCATTTATCTGACGCCG 597
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34620___md 551 AGCTTGATTATTTAGAGGATTTAGGGGTGAACGGCATTTATCTGACACCG 600
BSNT_05273___ 598 ATCTTTTCCGCGCCTTCTAATCATAAATACGACACGCTGGATTACTTTTC 647
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 601 ATCTTTTCCGCGCCTTCTAATCATAAATACGACACGCTGGATTACTTTTC 650
BSNT_05273___ 648 TATTGATCCGCATTTCGGGGATCCAGAGATTTTTCGTACATTTGTCAGCC 697
||||||||||||||||||||||||.|||.|||||||||||||.|||||||
BSU34620___md 651 TATTGATCCGCATTTCGGGGATCCTGAGCTTTTTCGTACATTGGTCAGCC 700
BSNT_05273___ 698 AGCTGCATCAGCGGGGGATGAGAATTATGCTTGATGCGGTTTTTAACCAT 747
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 701 AGCTGCATCAGCGGGGGATGAGAATTATGCTTGATGCGGTTTTTAACCAT 750
BSNT_05273___ 748 ATAGGAAGCGCGTCTCCGCAATGGCAGGATGTCGTCAAAAACGGAGATCT 797
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU34620___md 751 ATAGGAAGCGCGTCTCCGCAATGGCAGGATGTCGTCAAAAACGGAGATCA 800
BSNT_05273___ 798 ATCCCGCTATAAGGACTGGTTCCATATTCACTCTTTTCCCGTCACAGACG 847
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 801 ATCCCGCTATAAGGACTGGTTCCATATTCACTCTTTTCCCGTCACAGACG 850
BSNT_05273___ 848 ACAATTATGACAGATTTGCTTTTACAGCTGATATGCCGAAGCTAAACACG 897
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 851 ACAATTATGACAGATTTGCTTTTACAGCTGATATGCCGAAGCTAAACACG 900
BSNT_05273___ 898 GCTAATCCCGAAGTGCAGAAATATTTGCTTGATATTGCTTTGTACTGGAT 947
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU34620___md 901 GCTAATCCCGAGGTGCAGAAATATTTGCTTGATATTGCTTTGTACTGGAT 950
BSNT_05273___ 948 TCGCGAATTTGACATTGACGGCTGGCGTTTGGATGTCGCAAATGAAGTGG 997
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 951 TCGCGAATTTGACATTGACGGCTGGCGTTTGGATGTCGCAAATGAAGTGG 1000
BSNT_05273___ 998 ATCACGTGTTTTGGAAGACATTTAGGCAGGCTGTATCAGCAGAAAATCCT 1047
|||||||.|||||||||||||||||||||||||||||..|.|||||.|||
BSU34620___md 1001 ATCACGTTTTTTGGAAGACATTTAGGCAGGCTGTATCTACTGAAAAGCCT 1050
BSNT_05273___ 1048 GATGTTTATATTTTAGGTGAGATCTGGCATTCTGCCGAACCCTGGCTTAG 1097
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1051 GATGTTTATATTTTAGGTGAGATCTGGCATTCTGCCGAACCCTGGCTTAG 1100
BSNT_05273___ 1098 AGGGGATGAATTTCATGCGGCGATGAATTACCCTTTTACAGAGCCTATGA 1147
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1101 AGGGGATGAATTTCATGCGGCGATGAATTACCCTTTTACAGAGCCTATGA 1150
BSNT_05273___ 1148 TTGAATATTTTGCTGACCGGACGATTCCAGCCTCACGTATGGCTCACCGT 1197
|||||||.||||||||||.||||||..||||.||||||||||||||||||
BSU34620___md 1151 TTGAATACTTTGCTGACCAGACGATCTCAGCTTCACGTATGGCTCACCGT 1200
BSNT_05273___ 1198 GTCAATGCACATTTGATGAATGGAATGAAGCAGGCCAATGAGGTGATGTT 1247
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1201 GTCAATGCACATTTGATGAATGGAATGAAGCAGGCCAATGAGGTGATGTT 1250
BSNT_05273___ 1248 TAATTTACTGGATAGCC---ATACAAAGCGCCTTTTGACCAGATGCCGCA 1294
||||||||||||||||| ||||||||||||||||||||||||||||||
BSU34620___md 1251 TAATTTACTGGATAGCCATGATACAAAGCGCCTTTTGACCAGATGCCGCA 1300
BSNT_05273___ 1295 ATGATGAGAAGAAAGCACGCGCGTTGCTGGCCTTTATGTTTGCCCAGACA 1344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1301 ATGATGAGAAGAAAGCACGCGCGTTGCTGGCCTTTATGTTTGCCCAGACA 1350
BSNT_05273___ 1345 GGCTCACCATGCATCTATTACGGGACGGAAATCGGGCTGGACGGCGAAAA 1394
||||||||||||||.||||||||.|||||||||||||||.||||||||||
BSU34620___md 1351 GGCTCACCATGCATTTATTACGGAACGGAAATCGGGCTGAACGGCGAAAA 1400
BSNT_05273___ 1395 TGATCCATTATGCCGGAAATGTATGGTTTGGGAAAAGGAGAAGCAAAACC 1444
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU34620___md 1401 TGATCCATTATGCCGGAAATGTATGGTTTGGGAAAAAGAGAAGCAAAACC 1450
BSNT_05273___ 1445 AAGACATGCTGCGATTTATGAAACGGTTAATTGCTTTACGCAAGCAGGAA 1494
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34620___md 1451 AAGACATGCTGCAATTTATGAAACGGTTAATTGCTTTACGCAAGCAGGAA 1500
BSNT_05273___ 1495 AACACTTTATTGACTGAAGGACATCTTGAGTGGAATCTGCTGGACGACAA 1544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1501 AACACTTTATTGACTGAAGGACATCTTGAGTGGAATCTGCTGGACGACAA 1550
BSNT_05273___ 1545 AAATGATTTTATTAGCTTTTCGCGGACTCTTGATGAAAAAATACTGATTT 1594
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1551 AAATGATTTCATTAGCTTTTCGCGGACTCTTGATGAAAAAATACTGATTT 1600
BSNT_05273___ 1595 ATTTCTTTAATCAAGGGAATGCGGTTCAACACGTCAGTTTACGAGAGTTG 1644
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34620___md 1601 ATTTCTTTAATCAAGGGAATGTGGTTCAACACGTCAGTTTACGAGAGTTG 1650
BSNT_05273___ 1645 AATATTGATAGGAATAAGAAAATCTGTGATGCATGGACAGAGCAGCCGCT 1694
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md 1651 AATATTGATAGGAATAAGAAAATCTGTGATGCATGGACAGAGCAGCCGCT 1700
BSNT_05273___ 1695 TCATCATCACGATGTCATTGCTGTTCAGCCGGGAGAATTTTTGATTTTGA 1744
.||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU34620___md 1701 ACAGCATCACGATGTCATTGCCGTTCAGCCGGGAGAATTTTTGATTTTGA 1750
BSNT_05273___ 1745 GTGCTGCCGCCCCTGTATAA 1764
||||||||||||||||||||
BSU34620___md 1751 GTGCTGCCGCCCCTGTATAA 1770
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