Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05268 and BSU34600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_05268___yvdH.1.22522.seq
# -bsequence dna-align/BSU34600___mdxF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05268___yvdH-BSU34600___mdxF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05268___yvdH-BSU34600___mdxF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05268___yvdH
# 2: BSU34600___mdxF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1311
# Identity: 1290/1311 (98.4%)
# Similarity: 1290/1311 (98.4%)
# Gaps: 3/1311 ( 0.2%)
# Score: 6367.0
#
#
#=======================================
BSNT_05268___ 1 ATGAATAAACATCACACACTTGCAAAGCAAAAACGAAAGGCAGGGCTTTT 50
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34600___md 1 ATGAATAAACATCACACACTTACAAAGCAAAAACGAAAGGCAGGGCTTTT 50
BSNT_05268___ 51 ATCGATCATTCCAGGACTTGGGCAGATTGCGAATCAGCAATTGTCAAAGG 100
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34600___md 51 ATCGATCATTCCAGGACTTGGGCAGATTGCGAATCAGCAGTTGTCAAAGG 100
BSNT_05268___ 101 GGCTCTTATTTCTAGCCATCACAGGCTTGTTTGCTTTTGAATTATGCGTT 150
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34600___md 101 GGCTCTTATTTCTTGCCATCACAGGCTTGTTTGCTTTTGAATTATGCGTT 150
BSNT_05268___ 151 TTCGGTATACAGGCGCTAAGCGGATTGATGACATTGGGAAGTGTTCCCGG 200
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU34600___md 151 TTCGGTATACAGGCGCTAACCGGATTGATGACATTGGGAAGTGTTCCCGG 200
BSNT_05268___ 201 TGAAGATCACTCGCTGTTTATGCTGATTGAAGGCACGCTGCAATTGATCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 201 TGAAGATCACTCGCTGTTTATGCTGATTGAAGGCACGCTGCAATTGATCG 250
BSNT_05268___ 251 TGACGGTGATTTTCCTCATGTTCTATATCTTTAATATTCATGATTCGCGT 300
||||..||||||||||||||||||||||||||||||||||||||||.|||
BSU34600___md 251 TGACAATGATTTTCCTCATGTTCTATATCTTTAATATTCATGATTCACGT 300
BSNT_05268___ 301 AAGACAGCCGCTATGAAAGCGGCGGGTTTGGAGGTCAATACAACAGCCAA 350
|||||.||||||||||||||||||||||||||.|||||||||||||||||
BSU34600___md 301 AAGACCGCCGCTATGAAAGCGGCGGGTTTGGAAGTCAATACAACAGCCAA 350
BSNT_05268___ 351 GGATATGATCTGTCATGCGGGCGATAAAGGGTTTCCATATCTATTTACAC 400
||||||||||||||||||||||||||||||.|||||.|||||||||||||
BSU34600___md 351 GGATATGATCTGTCATGCGGGCGATAAAGGTTTTCCGTATCTATTTACAC 400
BSNT_05268___ 401 TGCCGGCATATATCATGATGGTGTTTTTTGTGATTATCTTTCCGGTTTTG 450
||||||||||||||||||||||| |||||||||||.||||||||||||
BSU34600___md 401 TGCCGGCATATATCATGATGGTG---TTTGTGATTATTTTTCCGGTTTTG 447
BSNT_05268___ 451 GTGACTCTGTTTGTTGCATTAACAAACTATGATTTTTATCATATTCCGCC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 448 GTGACTCTGTTTGTTGCATTAACAAACTATGATTTTTATCATATTCCGCC 497
BSNT_05268___ 501 TAATCGTCTGATTGACTGGGTCGGGTTTAAAAATTTCTTAAATATTTTTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 498 TAATCGTCTGATTGACTGGGTCGGGTTTAAAAATTTCTTAAATATTTTTT 547
BSNT_05268___ 551 TCCTTGGCTCCTATCGTGAAACATTTGTGAATGTACTGGGCTGGACGGTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 548 TCCTTGGCTCCTATCGTGAAACATTTGTGAATGTACTGGGCTGGACGGTT 597
BSNT_05268___ 601 ATCTGGACAATCTGCGCGACAACGCTGCAAATCATTTTAGGGATTGTGAC 650
||||||||||||||.||.|||||||||||||||||||||||.||||||||
BSU34600___md 598 ATCTGGACAATCTGTGCAACAACGCTGCAAATCATTTTAGGTATTGTGAC 647
BSNT_05268___ 651 GGCACTTTTCGTCAATCAGGATTTTATAAAAGGCAAGCGGATATTTCGAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 648 GGCACTTTTCGTCAATCAGGATTTTATAAAAGGCAAGCGGATATTTCGAA 697
BSNT_05268___ 701 TGATTTTCTTATTTCCATGGGCTGTTCCGGCTTTTATTACAATCATGAGT 750
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU34600___md 698 TGATTTTCTTATTTCCATGGGCTGTTCCGGCGTTTATTACAATCATGAGT 747
BSNT_05268___ 751 TTTTCCAACATGTTTAACGACAGCATAGGAGCGGTGAATGCACAGGTGAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 748 TTTTCCAACATGTTTAACGACAGCATAGGAGCGGTGAATGCACAGGTGAT 797
BSNT_05268___ 801 ACCATTATTCAATCACCTGCCGTTTGTCGAGCTGCCTGCGATCGCGTGGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 798 ACCATTATTCAATCACCTGCCGTTTGTCGAGCTGCCTGCGATCGCGTGGA 847
BSNT_05268___ 851 AGACTGATCCTTTCTGGACAAAGACAGCCCTCATTATGATTCAGACGTGG 900
||||.||||||||||||||||||||||||||||||||||||||.||||||
BSU34600___md 848 AGACCGATCCTTTCTGGACAAAGACAGCCCTCATTATGATTCAAACGTGG 897
BSNT_05268___ 901 CTCGGCTTTCCATATATATATGTCATGGTAACGGGAGTGCTTCAGGCGAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 898 CTCGGCTTTCCATATATATATGTCATGGTAACGGGAGTGCTTCAGGCGAT 947
BSNT_05268___ 951 TCCAGGTGAATTGTATGAAGCGGCAAAGATTGACGGGGCCACTTTTATTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 948 TCCAGGTGAATTGTATGAAGCGGCAAAGATTGACGGGGCCACTTTTATTC 997
BSNT_05268___ 1001 AGCGTTTTCGGCATATTACATTCCCGATGATTTTATTTGCCACAGCACCC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 998 AGCGTTTTCGGCATATTACATTCCCGATGATTTTATTTGCCACAGCACCC 1047
BSNT_05268___ 1051 GTGATGATTACTCAGTATACGTTTAATTTCAATAATTTCTCGATCATCTA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 1048 GTGATGATTACTCAGTATACGTTTAATTTCAATAATTTCTCGATCATCTA 1097
BSNT_05268___ 1101 TTTATTTAATGAGGGAGGGCCAGGCAGTGCGGGAGCCGGGGCCGGATCGA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 1098 TTTATTTAATGAGGGAGGGCCAGGCAGTGCGGGAGCCGGGGCCGGATCGA 1147
BSNT_05268___ 1151 CCGATATCTTAATTTCGTGGATTTATAAACTGACAACAGGCACATCACCC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 1148 CCGATATCTTAATTTCGTGGATTTATAAACTGACAACAGGCACATCACCC 1197
BSNT_05268___ 1201 CAATATTCCGTTGCGGCGGCTGTGACACTGTTAATTTCTTTCATTGTCAT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 1198 CAATATTCCGTTGCGGCGGCTGTGACACTGTTAATTTCTTTCATTGTCAT 1247
BSNT_05268___ 1251 TGGAATTTCACTGATTGCTTTCAAAAAATCGAATGCTTTTGGCAATGAGG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md 1248 TGGAATTTCACTGATTGCTTTCAAAAAATCGAATGCTTTTGGCAATGAGG 1297
BSNT_05268___ 1301 AGGTTATGTAG 1311
|||||||||||
BSU34600___md 1298 AGGTTATGTAG 1308
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