Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05264 and BSU34580

See Amino acid alignment / Visit BSNT_05264 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence dna-align/BSNT_05264___yvdJ.1.22522.seq
#    -bsequence dna-align/BSU34580___yvdJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05264___yvdJ-BSU34580___yvdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05264___yvdJ-BSU34580___yvdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05264___yvdJ
# 2: BSU34580___yvdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     869/885 (98.2%)
# Similarity:   869/885 (98.2%)
# Gaps:           0/885 ( 0.0%)
# Score: 4281.0
# 
#
#=======================================

BSNT_05264___      1 ATGAAGAATCTGGAGAATAAAAGCTTTATCATCCGCTGCCTGAAAGCGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU34580___yv      1 ATGAAGAATCTGGAGAATAAAAGCTTTATCATCCGCTGCCTGAAGGCGGC     50

BSNT_05264___     51 TGCATCTCCATCAGGTGTTTGCAGCTATGGGAATACCTTCAGCTGGCTGC    100
                     ||||||.|||||||||||||||.|||||||||||||||||||||||||||
BSU34580___yv     51 TGCATCCCCATCAGGTGTTTGCCGCTATGGGAATACCTTCAGCTGGCTGC    100

BSNT_05264___    101 AGCTCTCTTTTCTCTTTATGTTTTTAACGGCCTGCTTAATGGCGCCGTTA    150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU34580___yv    101 AGCTCTCTTTTCTCTTTCTGTTTTTAACGGCCTGCTTAATGGCGCCGTTA    150

BSNT_05264___    151 GCGGTTTCGTTTGTGAAAATGGATCGCTTCAGCGTTGCATCTTTTATGCC    200
                     ||||||||||||||||||||||||||||||||||||.|||||||.|||||
BSU34580___yv    151 GCGGTTTCGTTTGTGAAAATGGATCGCTTCAGCGTTTCATCTTTCATGCC    200

BSNT_05264___    201 GTCAGCGATTCAAGGGGTTAATGATCAATTTGCTGATCAATTACAGGGTT    250
                     |||||||||||||||.||||||||||||||||||||||||||.|||||||
BSU34580___yv    201 GTCAGCGATTCAAGGAGTTAATGATCAATTTGCTGATCAATTGCAGGGTT    250

BSNT_05264___    251 TTCAAATCAGGAACGGAAAACTAACAGGCGGGAAGAGCTCTGAGAGGATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    251 TTCAAATCAGGAACGGAAAACTAACAGGCGGGAAGAGCTCTGAGAGGATT    300

BSNT_05264___    301 GAAGATGGGCAGAATGTGATGGCAGTCGATATGAAGCATGAATATGAGAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    301 GAAGATGGGCAGAATGTGATGGCAGTCGATATGAAGCATGAATATGAGAC    350

BSNT_05264___    351 AAGCGGTGAAAATGGGCGATTGAAAGTAACTGGATTTGAAAACGCCGTCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34580___yv    351 AAGCGGTGAAAATGGGCGATTGAAAGTAACTGGATTTGAAAACGCCATCA    400

BSNT_05264___    401 TATTTCAACCTGATCAACTGGTGATCACCGATCAAAACGAAACGGGGTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    401 TATTTCAACCTGATCAACTGGTGATCACCGATCAAAACGAAACGGGGTTT    450

BSNT_05264___    451 TCTGTTGGCTATGCGAAAATGGACGTTAAGCTCGAGAAACCAAACGTCCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    451 TCTGTTGGCTATGCGAAAATGGACGTTAAGCTCGAGAAACCAAACGTCCA    500

BSNT_05264___    501 TGATGTAGAGGTCTTGATCGATACATTGTGGTTGGCACAGTATAAGCCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    501 TGATGTAGAGGTCTTGATCGATACATTGTGGTTGGCACAGTATAAGCCGA    550

BSNT_05264___    551 TGATCATGATGCTGGCATATACGGTGGTTTCTATGATCCAGCTTTTGTTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    551 TGATCATGATGCTGGCATATACGGTGGTTTCTATGATCCAGCTTTTGTTA    600

BSNT_05264___    601 ACGTTTGTTCTTGCAGGTGGCCTCTGGATCACAAAAATATCAAACATGGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    601 ACGTTTGTTCTTGCAGGTGGCCTCTGGATCACAAAAATATCAAACATGGT    650

BSNT_05264___    651 CTCTATTGCATCATTCAAGGAAGCAGTATCTACGGCGATTTGCGCCTCGG    700
                     ||||||||||||||||||||||||.|..||||..|||||||||||.||.|
BSU34580___yv    651 CTCTATTGCATCATTCAAGGAAGCGGCCTCTATAGCGATTTGCGCATCAG    700

BSNT_05264___    701 CACTGCCGGCATTTGCGGCAGCTGCTATCGGCATGGTTCATTTTGATTTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    701 CACTGCCGGCATTTGCGGCAGCTGCTATCGGCATGGTTCATTTTGATTTG    750

BSNT_05264___    751 ATTACTGTATTGATGATCCATTCGTGTGGCGTTACTTTGATGATCTCTTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    751 ATTACTGTATTGATGATCCATTCGTGTGGCGTTACTTTGATGATCTCTTT    800

BSNT_05264___    801 TGCATTTAGATATTTGACCAAAACCCGCCGTGATAATGGAAACTTACATT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34580___yv    801 TGCATTTAGATATTTGACCAAAACCCGCCGTGATAATGGAAACTTACATT    850

BSNT_05264___    851 CGGGAGGAAATGATGATAAATCAGCGGTTATTTGA    885
                     |||||||||||||||||||||||||||||||||||
BSU34580___yv    851 CGGGAGGAAATGATGATAAATCAGCGGTTATTTGA    885


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