Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05260 and BSU34550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_05260___pgcM.1.22522.seq
# -bsequence dna-align/BSU34550___pgcM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05260___pgcM-BSU34550___pgcM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05260___pgcM-BSU34550___pgcM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05260___pgcM
# 2: BSU34550___pgcM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity: 653/681 (95.9%)
# Similarity: 653/681 (95.9%)
# Gaps: 6/681 ( 0.9%)
# Score: 3164.5
#
#
#=======================================
BSNT_05260___ 1 ATGAAAGCGGTCATTTTTGATTTAGACGGAGTGATAACAGATACTGCTGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg 1 ATGAAAGCGGTCATTTTTGATTTAGACGGAGTGATAACAGATACTGCTGA 50
BSNT_05260___ 51 ATATCATTTTCTCGCTTGGAAGCACATCGCAGAACAAATCAATATCCCCT 100
||||||||||||||||||||||||||||||||||||||||.|||||||.|
BSU34550___pg 51 ATATCATTTTCTCGCTTGGAAGCACATCGCAGAACAAATCGATATCCCTT 100
BSNT_05260___ 101 TTGACAGAGACATGAATGAAAGGCTAAAAGGAATCAGCAGAGAAGAGTCA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg 101 TTGACAGAGACATGAATGAAAGGCTAAAAGGAATCAGCAGAGAAGAGTCA 150
BSNT_05260___ 151 CTTGAAAGCATATTGATCTCTGGCGGTGCGGAAACAAAGTATACAAATGC 200
|||||||||||||||||||.||||||.|||||||||||||||||||||||
BSU34550___pg 151 CTTGAAAGCATATTGATCTTTGGCGGGGCGGAAACAAAGTATACAAATGC 200
BSNT_05260___ 201 GGAGAAACAAGAACTTATGCATCGGAAAAATCATGATTATCAAACGCTGA 250
||||||||||||.|||||||||||||||||||..||||||||||.|||||
BSU34550___pg 201 GGAGAAACAAGAGCTTATGCATCGGAAAAATCGCGATTATCAAATGCTGA 250
BSNT_05260___ 251 TCAGCAAATTGACGCCGGAAGATCTTTTACCGGGGATTGGCAGGCTCCTA 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34550___pg 251 TCAGCAAATTGACGCCGGAAGATCTTTTACCGGGGATTGGCAGGCTTCTA 300
BSNT_05260___ 301 TGTCAATTGAAAAACGAAAATATAAAAATCGGGTTAGCATCTTCAAGTCG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg 301 TGTCAATTGAAAAACGAAAATATAAAAATCGGGTTAGCATCTTCAAGTCG 350
BSNT_05260___ 351 CAATGCTCCTAAGATTTTAAGACGTTTGGCAATTATCGATGATTTTGATG 400
||||||||||||||||||||||||.|||||||||||||||||||||.|||
BSU34550___pg 351 CAATGCTCCTAAGATTTTAAGACGCTTGGCAATTATCGATGATTTTCATG 400
BSNT_05260___ 401 CCATTGTTGATCCGACGGCTCTTGCGCAGGGGAAACCTGATCCTGACATC 450
|||||||||||||||||.||||||||.|||||||.|||||||||||||||
BSU34550___pg 401 CCATTGTTGATCCGACGACTCTTGCGAAGGGGAAGCCTGATCCTGACATC 450
BSNT_05260___ 451 TTTTTAACAGCTGCAGCGCTGCTCGATGTTTCCCCTGCTGATTGCGCGGC 500
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34550___pg 451 TTTTTAACAGCTGCAGCGATGCTCGATGTTTCCCCTGCTGATTGCGCGGC 500
BSNT_05260___ 501 AATAGAAGACGCAGAAGCAGGCATTTCTGCAATCAAATCTGCGGGGATGT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg 501 AATAGAAGACGCAGAAGCAGGCATTTCTGCAATCAAATCTGCGGGGATGT 550
BSNT_05260___ 551 TTGCGGTTGGTGTAGGTCAAGGACAGCCGATGCTTGGTGCTGATCTGGTT 600
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34550___pg 551 TTGCGGTTGGTGTCGGTCAAGGACAGCCGATGCTTGGTGCTGATCTGGTT 600
BSNT_05260___ 601 GTGAGGCAGACGAATGATTTGACGCTTGAGCTGTTACATGAGGAATGGGA 650
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34550___pg 601 GTGAGGCAGACGAGTGATTTGACGCTTGAGCTGTTACATGAGGAATGGGA 650
BSNT_05260___ 651 GCAGTATAGAATAA------AAAGTGTTTAA 675
|||||||||||||| .||.|..||.|
BSU34550___pg 651 GCAGTATAGAATAAGGGAGTCAATTCCTTGA 681
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