Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05260 and BSU34550

See Amino acid alignment / Visit BSNT_05260 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_05260___pgcM.1.22522.seq
#    -bsequence dna-align/BSU34550___pgcM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05260___pgcM-BSU34550___pgcM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05260___pgcM-BSU34550___pgcM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05260___pgcM
# 2: BSU34550___pgcM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity:     653/681 (95.9%)
# Similarity:   653/681 (95.9%)
# Gaps:           6/681 ( 0.9%)
# Score: 3164.5
# 
#
#=======================================

BSNT_05260___      1 ATGAAAGCGGTCATTTTTGATTTAGACGGAGTGATAACAGATACTGCTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg      1 ATGAAAGCGGTCATTTTTGATTTAGACGGAGTGATAACAGATACTGCTGA     50

BSNT_05260___     51 ATATCATTTTCTCGCTTGGAAGCACATCGCAGAACAAATCAATATCCCCT    100
                     ||||||||||||||||||||||||||||||||||||||||.|||||||.|
BSU34550___pg     51 ATATCATTTTCTCGCTTGGAAGCACATCGCAGAACAAATCGATATCCCTT    100

BSNT_05260___    101 TTGACAGAGACATGAATGAAAGGCTAAAAGGAATCAGCAGAGAAGAGTCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg    101 TTGACAGAGACATGAATGAAAGGCTAAAAGGAATCAGCAGAGAAGAGTCA    150

BSNT_05260___    151 CTTGAAAGCATATTGATCTCTGGCGGTGCGGAAACAAAGTATACAAATGC    200
                     |||||||||||||||||||.||||||.|||||||||||||||||||||||
BSU34550___pg    151 CTTGAAAGCATATTGATCTTTGGCGGGGCGGAAACAAAGTATACAAATGC    200

BSNT_05260___    201 GGAGAAACAAGAACTTATGCATCGGAAAAATCATGATTATCAAACGCTGA    250
                     ||||||||||||.|||||||||||||||||||..||||||||||.|||||
BSU34550___pg    201 GGAGAAACAAGAGCTTATGCATCGGAAAAATCGCGATTATCAAATGCTGA    250

BSNT_05260___    251 TCAGCAAATTGACGCCGGAAGATCTTTTACCGGGGATTGGCAGGCTCCTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34550___pg    251 TCAGCAAATTGACGCCGGAAGATCTTTTACCGGGGATTGGCAGGCTTCTA    300

BSNT_05260___    301 TGTCAATTGAAAAACGAAAATATAAAAATCGGGTTAGCATCTTCAAGTCG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg    301 TGTCAATTGAAAAACGAAAATATAAAAATCGGGTTAGCATCTTCAAGTCG    350

BSNT_05260___    351 CAATGCTCCTAAGATTTTAAGACGTTTGGCAATTATCGATGATTTTGATG    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||.|||
BSU34550___pg    351 CAATGCTCCTAAGATTTTAAGACGCTTGGCAATTATCGATGATTTTCATG    400

BSNT_05260___    401 CCATTGTTGATCCGACGGCTCTTGCGCAGGGGAAACCTGATCCTGACATC    450
                     |||||||||||||||||.||||||||.|||||||.|||||||||||||||
BSU34550___pg    401 CCATTGTTGATCCGACGACTCTTGCGAAGGGGAAGCCTGATCCTGACATC    450

BSNT_05260___    451 TTTTTAACAGCTGCAGCGCTGCTCGATGTTTCCCCTGCTGATTGCGCGGC    500
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34550___pg    451 TTTTTAACAGCTGCAGCGATGCTCGATGTTTCCCCTGCTGATTGCGCGGC    500

BSNT_05260___    501 AATAGAAGACGCAGAAGCAGGCATTTCTGCAATCAAATCTGCGGGGATGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34550___pg    501 AATAGAAGACGCAGAAGCAGGCATTTCTGCAATCAAATCTGCGGGGATGT    550

BSNT_05260___    551 TTGCGGTTGGTGTAGGTCAAGGACAGCCGATGCTTGGTGCTGATCTGGTT    600
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34550___pg    551 TTGCGGTTGGTGTCGGTCAAGGACAGCCGATGCTTGGTGCTGATCTGGTT    600

BSNT_05260___    601 GTGAGGCAGACGAATGATTTGACGCTTGAGCTGTTACATGAGGAATGGGA    650
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34550___pg    601 GTGAGGCAGACGAGTGATTTGACGCTTGAGCTGTTACATGAGGAATGGGA    650

BSNT_05260___    651 GCAGTATAGAATAA------AAAGTGTTTAA    675
                     ||||||||||||||      .||.|..||.|
BSU34550___pg    651 GCAGTATAGAATAAGGGAGTCAATTCCTTGA    681


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