Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05259 and BSU34540

See Amino acid alignment / Visit BSNT_05259 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_05259___clpP.1.22522.seq
#    -bsequence dna-align/BSU34540___clpP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05259___clpP-BSU34540___clpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05259___clpP-BSU34540___clpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05259___clpP
# 2: BSU34540___clpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     587/594 (98.8%)
# Similarity:   587/594 (98.8%)
# Gaps:           0/594 ( 0.0%)
# Score: 2907.0
# 
#
#=======================================

BSNT_05259___      1 ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl      1 ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGC     50

BSNT_05259___     51 GTATGACATTTATTCTCGTCTATTAAAGGATCGTATCATCATGCTTGGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl     51 GTATGACATTTATTCTCGTCTATTAAAGGATCGTATCATCATGCTTGGAT    100

BSNT_05259___    101 CTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl    101 CTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTC    150

BSNT_05259___    151 TTAGCAGCAGAAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl    151 TTAGCAGCAGAAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCC    200

BSNT_05259___    201 GGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACCATGCAGTTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl    201 GGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACCATGCAGTTTA    250

BSNT_05259___    251 TTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGC    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU34540___cl    251 TTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGC    300

BSNT_05259___    301 GCTTTCCTGCTTGCAGCCGGCGAAAAAGGCAAACGCTATGCGCTTCCAAA    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl    301 GCGTTCCTGCTTGCAGCCGGCGAAAAAGGCAAACGCTATGCGCTTCCAAA    350

BSNT_05259___    351 CAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAGGCGA    400
                     ||||||||||||||||||||||||.||||||||||||||||||||.||||
BSU34540___cl    351 CAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA    400

BSNT_05259___    401 CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAACTA    450
                     ||||||||||||||||.||||||||||||||||||||||||||||||.||
BSU34540___cl    401 CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTA    450

BSNT_05259___    451 AACAAAGTCCTTGCTGAACGTACTGGCCAGCCGCTTGAAGTGATCGAACG    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU34540___cl    451 AACAAAGTCCTAGCTGAACGTACTGGCCAGCCGCTTGAAGTGATCGAACG    500

BSNT_05259___    501 CGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl    501 CGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACG    550

BSNT_05259___    551 GCCTGATTGACAAAATTTTGACTCACACAGAAGACAAAAAGTAA    594
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU34540___cl    551 GCCTGATTGACAAAATTTTGACTCACACAGAAGACAAAAAGTAA    594


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