Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05209 and BSU34490

See Amino acid alignment / Visit BSNT_05209 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_05209___yvdS.1.22522.seq
#    -bsequence dna-align/BSU34490___yvdS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05209___yvdS-BSU34490___yvdS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05209___yvdS-BSU34490___yvdS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05209___yvdS
# 2: BSU34490___yvdS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     334/336 (99.4%)
# Similarity:   334/336 (99.4%)
# Gaps:           0/336 ( 0.0%)
# Score: 1662.0
# 
#
#=======================================

BSNT_05209___      1 TTGAATTGGGTTCTTGTTTTTATTGCAGGGCTTTTAGAGGTTGTTTGGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34490___yv      1 TTGAATTGGGTTCTTGTTTTTATTGCAGGGCTTTTAGAGGTTGTTTGGGC     50

BSNT_05209___     51 CTCTTCCCTCAAACATGCCGATTCGCTTTTGGATTGGATCATCATTTTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34490___yv     51 CTCTTCCCTCAAACATGCCGATTCGCTTTTGGATTGGATCATCATTTTTA    100

BSNT_05209___    101 TCTTAATCGCGGTCAGCTTTATCCTGTTGATCCGCTCTTATCAAAAAATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34490___yv    101 TCTTAATCGCGGTCAGCTTTATCCTGTTGATCCGCTCTTATCAAAAAATC    150

BSNT_05209___    151 CCGATGGCCGCGGCGTACACTGTGTTTGTGGGAATCGGAACCGTCGGAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34490___yv    151 CCGATGGCCGCGGCGTACACTGTGTTTGTGGGAATCGGAACCGTCGGAAC    200

BSNT_05209___    201 ATATCTGACTGGAATTGTTCTGGGCGAATCCTTCTCAGCAGCCCAAATGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34490___yv    201 ATATCTGACTGGAATTGTTCTGGGCGAATCCTTCTCAGCAGCCCAAATGT    250

BSNT_05209___    251 TCTTTTTAGCTTTATTGCTGGCTGGCATTTTAGGAATGAAATTATTTACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34490___yv    251 TCTTTTTAGCTTTATTGCTGGCTGGCATTTTAGGAATGAAATTATTTACG    300

BSNT_05209___    301 AAAGAAAGCAAATCTCAACCGGGAGGTGAACAATAA    336
                     |||||||||||||||||.||||||||||||.|||||
BSU34490___yv    301 AAAGAAAGCAAATCTCAGCCGGGAGGTGAAAAATAA    336


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