Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05208 and BSU34480

See Amino acid alignment / Visit BSNT_05208 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_05208___yvdT.1.22522.seq
#    -bsequence dna-align/BSU34480___yvdT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05208___yvdT-BSU34480___yvdT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05208___yvdT-BSU34480___yvdT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05208___yvdT
# 2: BSU34480___yvdT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     573/585 (97.9%)
# Similarity:   573/585 (97.9%)
# Gaps:           0/585 ( 0.0%)
# Score: 2817.0
# 
#
#=======================================

BSNT_05208___      1 ATGCCAAAACAAACATCGGGCAAATATGAAAAAATTCTGCAGGCTGCCAT     50
                     ||||||||||||||||||||.|||||.||||||||..|||||||.|||||
BSU34480___yv      1 ATGCCAAAACAAACATCGGGTAAATACGAAAAAATATTGCAGGCGGCCAT     50

BSNT_05208___     51 AGAAGTGATTTCTGAAAAAGGCCTCGACAAAGCTTCTATTTCTGATATTG    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34480___yv     51 AGAAGTCATTTCTGAAAAAGGCCTCGACAAAGCTTCTATTTCTGATATTG    100

BSNT_05208___    101 TCAAAAAGGCCGGCACTGCCCAAGGAACATTCTATTTGTATTTTTCATCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34480___yv    101 TCAAAAAGGCCGGCACTGCCCAAGGAACATTCTATTTGTATTTTTCATCT    150

BSNT_05208___    151 AAAAATGCCCTCATACCGGCCATTGCAGAAAATCTTCTCACCCATACACT    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU34480___yv    151 AAAAATGCCCTCATACCGGCCATTGCAGAAAATCTCCTCACCCATACACT    200

BSNT_05208___    201 TGATCAAATCAAAGGTAGGCTGCATGGGGACGAAGATTTTTGGACCGTTT    250
                     |||||||||||||||||||||.|||||||||||.||||||||||||||||
BSU34480___yv    201 TGATCAAATCAAAGGTAGGCTCCATGGGGACGAGGATTTTTGGACCGTTT    250

BSNT_05208___    251 TAGATATATTAATTGATGAGACATTTCTCATTACAGAACGCCATAAGGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34480___yv    251 TAGATATATTAATTGATGAGACATTTCTCATTACAGAACGCCATAAGGAT    300

BSNT_05208___    301 ATTATTGTCCTCTGTTATTCCGGGCTTGCGATCGACCACTCCATGGAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34480___yv    301 ATTATTGTCCTCTGTTATTCCGGGCTTGCGATCGACCACTCCATGGAAAA    350

BSNT_05208___    351 ATGGGAGACGATCTATCAGCCTTATTATTCCTGGCTTGAACAAATCATCA    400
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU34480___yv    351 ATGGGAGACGATCTATCAGCCTTATTATTCCTGGCTTGAAAAAATCATCA    400

BSNT_05208___    401 ACAAGGCCATTGCAAACCATGAGGTAACGGAAGGCATCAATTCAAAATGG    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU34480___yv    401 ACAAGGCCATTGCAAACCATGAGGTAACGGAAGGAATCAATTCAAAATGG    450

BSNT_05208___    451 ACGGCCAGAACGATTATCAACTTGGTCGAGAATACTGCGGAACGATTCTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34480___yv    451 ACGGCCAGAACGATTATCAACTTGGTCGAGAATACTGCGGAACGATTCTA    500

BSNT_05208___    501 TATCGGATTTGAACAAGATGAAAATGTTGAAGTGTATAAAAAGGAAATTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34480___yv    501 TATCGGATTTGAACAAGATGAAAATGTTGAAGTGTATAAAAAGGAAATTT    550

BSNT_05208___    551 TCACTTTCTTAAAACGGAGCTTAGGCACTGCTTAA    585
                     |||||||||||||||||||||||||.|||||||||
BSU34480___yv    551 TCACTTTCTTAAAACGGAGCTTAGGTACTGCTTAA    585


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