Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05201 and BSU34440
See
Amino acid alignment /
Visit
BSNT_05201 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_05201.1.22522.seq
# -bsequence dna-align/BSU34440___pbpE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05201-BSU34440___pbpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05201-BSU34440___pbpE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05201
# 2: BSU34440___pbpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity: 939/1356 (69.2%)
# Similarity: 939/1356 (69.2%)
# Gaps: 402/1356 (29.6%)
# Score: 4635.0
#
#
#=======================================
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 1 ATGAAGCAGAATAAAAGAAAGCATCTTCAGACGTTATTTGAGACATTAGG 50
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 51 CGAAAAACATCAGTTTAACGGGACGGTTCTGGCTGCGGAGGGTGGCGATA 100
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 101 TTTTATATCACCACTCTTTTGGCTATGCGGAAATGACGGAAAAACGCCCG 150
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 151 TTGAAAACCAACTCTTTGTTTGAGTTAGCGTCTTTGTCAAAGCCTTTTAC 200
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 201 AGCATTGGGAATCATCTTGCTGGAGGAGAAGGGGATTCTTGGCTATGAGG 250
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 251 ATAAAGTGGATCGCTGGCTGCCCGGTTTTCCGTATCAGGGCGTAACGATT 300
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 301 CGGCATTTATTGAACCATACGTCAGGGCTTCCTGATTATATGGGATGGTT 350
BSNT_05201 0 -------------------------------------------------- 0
BSU34440___pb 351 TTTTGCCAATTGGGATTCACACAAGATTGCGGTGAATCAGGATATTGTCG 400
BSNT_05201 1 --ATGCTGATGAATGAGGGGCTATCTGGTTATTTTGAACCGAATGAAGGC 48
||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 401 ATATGCTGATGAATGAGGGGCTATCTGGTTATTTTGAACCGAATGAAGGC 450
BSNT_05201 49 TGGATGTACAGCAATACGGGGTATGTGCTGCTGGCGGTTATCATTGAAAA 98
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 451 TGGATGTACAGCAATACGGGGTATGTGCTGCTGGCGGTTATCATTGAAAA 500
BSNT_05201 99 AGCATCTGGCATGAGCTATGCGGATTTTATGAAAACAAGTATTTTTTCAC 148
||||||||||||||||||||||||||||||.||||||||||||||||.||
BSU34440___pb 501 AGCATCTGGCATGAGCTATGCGGATTTTATAAAAACAAGTATTTTTTTAC 550
BSNT_05201 149 CGGCAGGCATGAATGAAACAAGAGTGTATAACAGGAGGCTTTCGCCTGAG 198
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 551 CGGCAGGCATGAATGAAACAAGAGTGTATAACAGGAGGCTTTCGCCTGAG 600
BSNT_05201 199 CGAATTGATCATTATGCATATGGATATGTGTATGATGTACATTCCGAAAC 248
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 601 CGAATTGATCATTATGCATATGGATATGTGTATGATGTACATTCCGAAAC 650
BSNT_05201 249 ATACGTCCTTCCTGATGAGCTGGAGGAAACGAACTATGTTGTGTATCTCG 298
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 651 ATACGTCCTCCCTGATGAGCTGGAGGAAACGAACTATGTTGTGTATCTCG 700
BSNT_05201 299 ATGGCATACAGGGAGATGGGACGGTGAACTCTGTCACAAGCGATTTGTTT 348
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU34440___pb 701 ATGGCATACAGGGAGATGGGACGGTTAACTCTGTCACAAGCGATTTGTTT 750
BSNT_05201 349 CGATTTGATCAGGCTTTATATCAGGACGATTTCATCAGCAAGGCTTCTAA 398
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 751 CGATTTGATCAGGCTTTATATCAGGACGATTTCATCAGCAAGGCTTCTAA 800
BSNT_05201 399 GGAATCTGCGTTTTCTCCAGTGCGTCTCAACAATGGAGAAACAATTGATT 448
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU34440___pb 801 GGAATCTGCGTTTTCTCCAGTGCGCCTCAACAATGGAGAAACAATTGATT 850
BSNT_05201 449 ATGGCTTTGGCTGGGTACTGCAAAACAGTCCTGAAAAAGGGCGGGTTGTC 498
||||||||||||||||.|||||||||||||||||||||||||||.|||||
BSU34440___pb 851 ATGGCTTTGGCTGGGTGCTGCAAAACAGTCCTGAAAAAGGGCGGATTGTC 900
BSNT_05201 499 AGCCACAGCGGAGGATGGCCCGGCTATTCGACGATGATGATCCGATATAT 548
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 901 AGCCACAGCGGAGGATGGCCCGGCTATTCGACGATGATGATCCGATATAT 950
BSNT_05201 549 CGATCATCGTAAAACGCTGATCTATTTGAGTAATAAGGAAGAGGATACTG 598
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 951 CGATCATCGTAAAACGCTGATCTATTTGAGTAATAAGGAAGAGGATACTG 1000
BSNT_05201 599 AATATGAACAAGCGATTCTGAAGGCGGCGGAACATATTCTATTTGGCCAG 648
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 1001 AATATGAACAAGCGATTCTGAAGGCGGCGGAACATATTCTATTTGGCCAG 1050
BSNT_05201 649 CCATATGAGGTCCCGGAACGTCCTGCTGATAAAAAGAAAAAAGCAATTGA 698
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 1051 CCATATGATGTCCCGGAACGTCCTGCTGATAAAAAGAAAAAAGCAATTGA 1100
BSNT_05201 699 TACGGCGATATACAGCCGCTATGTTGGCAGCTACCTGTTGCAGGATGGGA 748
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 1101 TACGGCGATATACAGCCGCTATGTTGGCAGCTACCTGTTGCAGGATGGGA 1150
BSNT_05201 749 CGGCTGCACAGGTGACTGCCGAGAATGAACGGCTTTATTTGGAGATCGCC 798
||||||||||||||||..||||||||||||||||||||||||||||||||
BSU34440___pb 1151 CGGCTGCACAGGTGACAACCGAGAATGAACGGCTTTATTTGGAGATCGCC 1200
BSNT_05201 799 GGACGGCTGAGACTGGAGTTGTTTCCTTCTTCGGAAACCCGTTTCTTTCT 848
||||.|||||||||||||||.||||||||.||||||||||||||||||||
BSU34440___pb 1201 GGACAGCTGAGACTGGAGTTATTTCCTTCCTCGGAAACCCGTTTCTTTCT 1250
BSNT_05201 849 GCGAGCATTGTCTGTTGAAGTCGAGTTTACGTTAGGTGTGGATGCTGCGA 898
||||||||||||||||||||||||||||||.|||||||.|||||||||||
BSU34440___pb 1251 GCGAGCATTGTCTGTTGAAGTCGAGTTTACATTAGGTGAGGATGCTGCGA 1300
BSNT_05201 899 AAAGCTTTATCCTCTATGAGGATGGCTCAGAGGAAGAAGCGGTCCGTACG 948
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34440___pb 1301 AAAGCTTTATCCTCTATGAGGATGGCTCAGAGGAAGAAGCGGTCCGTACG 1350
BSNT_05201 949 AAGTAG 954
||||||
BSU34440___pb 1351 AAGTAG 1356
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.