Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05198 and BSU34410

See Amino acid alignment / Visit BSNT_05198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence dna-align/BSNT_05198___yveG.1.22522.seq
#    -bsequence dna-align/BSU34410___yveG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05198___yveG-BSU34410___yveG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05198___yveG-BSU34410___yveG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05198___yveG
# 2: BSU34410___yveG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     282/288 (97.9%)
# Similarity:   282/288 (97.9%)
# Gaps:           0/288 ( 0.0%)
# Score: 1386.0
# 
#
#=======================================

BSNT_05198___      1 ATGATTCGCGCTGACGGCAGAACAGATTTATCTGCCAGGTATGTGATTGA     50
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34410___yv      1 ATGATTCGCGCTAACGGCAGAACAGATTTATCTGCCAGGTATGTGATTGA     50

BSNT_05198___     51 AACAGCAGATCATGAACTGATTTACATTGAAAACAATGGAATACGGCAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34410___yv     51 AACAGCAGATCATGAACTGATTTACATTGAAAACAATGGAATACGGCAAG    100

BSNT_05198___    101 TCAGCGAGCCGTTTCGAAAACAAGCGGCAGCCGGGGAAATTATTGATCCG    150
                     |||||.||||||||||||||||||||||||||||||||||||||||.|||
BSU34410___yv    101 TCAGCAAGCCGTTTCGAAAACAAGCGGCAGCCGGGGAAATTATTGAACCG    150

BSNT_05198___    151 GAGCATGTTTATTTTCGTACGGTACCGACGTTTGAAACAGGCAGTGAAGA    200
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU34410___yv    151 GAGCATGTTTATTTTCGTACGGTACCGACGTTTGAAACAGGCAGTGAAGT    200

BSNT_05198___    201 CTATCAATGGCTCCATGACCGCTTGTTTATCGGTTCCGCAGAAAGAACCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34410___yv    201 CTATCAATGGCTCCATGACCGCTTGTTTATCGGTTCCGCAGAAAGAACCC    250

BSNT_05198___    251 CTGATTACGTTCGACTAGACATTTATGAAGTGCAGTAA    288
                     ||||||||||||.||||||||||||||||||.||||||
BSU34410___yv    251 CTGATTACGTTCTACTAGACATTTATGAAGTACAGTAA    288


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.