Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05197 and BSU34400

See Amino acid alignment / Visit BSNT_05197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence dna-align/BSNT_05197___padC.1.22522.seq
#    -bsequence dna-align/BSU34400___padC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05197___padC-BSU34400___padC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05197___padC-BSU34400___padC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05197___padC
# 2: BSU34400___padC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 486
# Identity:     483/486 (99.4%)
# Similarity:   483/486 (99.4%)
# Gaps:           0/486 ( 0.0%)
# Score: 2403.0
# 
#
#=======================================

BSNT_05197___      1 ATGGAAAACTTTATCGGAAGCCACATGATTTATACGTATGAAAACGGCTG     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU34400___pa      1 ATGGAAAACTTTATCGGAAGCCACATGATTTATACGTATGAAAACGGATG     50

BSNT_05197___     51 GGAATACGAGATTTATATTAAAAACGACCATACAATTGATTATAGAATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34400___pa     51 GGAATACGAGATTTATATTAAAAACGACCATACAATTGATTATAGAATTC    100

BSNT_05197___    101 ATAGCGGAATGGTTGCCGGACGCTGGGTTCGGGATCAGGAAGTGAATATT    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU34400___pa    101 ATAGCGGAATGGTTGCCGGACGCTGGGTTCGAGATCAGGAAGTGAATATT    150

BSNT_05197___    151 GTCAAACTGACAGAAGGCGTATATAAAGTGTCTTGGACAGAGCCGACTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34400___pa    151 GTCAAACTGACAGAAGGCGTATATAAAGTGTCTTGGACAGAGCCGACTGG    200

BSNT_05197___    201 CACGGATGTTTCATTAAACTTTATGCCAAATGAAAAACGCATGCACGGCA    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU34400___pa    201 CACGGATGTTTCATTAAACTTTATGCCAAATGAAAAACGCATGCATGGCA    250

BSNT_05197___    251 TTATTTTCTTCCCGAAATGGGTGCATGAACATCCTGAAATTACGGTTTGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34400___pa    251 TTATTTTCTTCCCGAAATGGGTGCATGAACATCCTGAAATTACGGTTTGC    300

BSNT_05197___    301 TACCAAAATGACCACATTGATTTGATGAAAGAATCCCGCGAAAAATATGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34400___pa    301 TACCAAAATGACCACATTGATTTGATGAAAGAATCCCGCGAAAAATATGA    350

BSNT_05197___    351 AACGTATCCAAAATACGTTGTACCTGAATTTGCGGAAATTACATTTCTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34400___pa    351 AACGTATCCAAAATACGTTGTACCTGAATTTGCGGAAATTACATTTCTGA    400

BSNT_05197___    401 AAAATGAAGGAGTCGACAACGAAGAAGTGATTTCGAAGGCTCCTTATGAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34400___pa    401 AAAATGAAGGAGTCGACAACGAAGAAGTGATTTCGAAGGCTCCTTATGAG    450

BSNT_05197___    451 GGAATGACAGACGATATTCGCGCGGGAAGATTATAA    486
                     ||||||||||||||||||||||||||||||||||||
BSU34400___pa    451 GGAATGACAGACGATATTCGCGCGGGAAGATTATAA    486


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