Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05181 and BSU34280

See Amino acid alignment / Visit BSNT_05181 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence dna-align/BSNT_05181___yveT.1.22522.seq
#    -bsequence dna-align/BSU34280___epsJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05181___yveT-BSU34280___epsJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05181___yveT-BSU34280___epsJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05181___yveT
# 2: BSU34280___epsJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1035
# Identity:    1001/1035 (96.7%)
# Similarity:  1001/1035 (96.7%)
# Gaps:           6/1035 ( 0.6%)
# Score: 4880.5
# 
#
#=======================================

BSNT_05181___      1 ATGACCCCGCTCGTCAGCATTATTGTCCCGATGTATCATGTTGAACCATT     50
                     ||||.|||||||||||||||||||||||||||||||.|||||||||||||
BSU34280___ep      1 ATGATCCCGCTCGTCAGCATTATTGTCCCGATGTATAATGTTGAACCATT     50

BSNT_05181___     51 TATAGGGGAGTGCATTGATTCTTTGCTTCGTCAAACGCTTTCTGATATTG    100
                     |||||..|||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep     51 TATAGAAGAGTGCATTGATTCTTTGCTTCGTCAAACGCTTTCTGATATTG    100

BSNT_05181___    101 AAATCATCCTCGTGAATGACGGAACACCGGATCGTTCAGGCGAAATTGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    101 AAATCATCCTCGTGAATGACGGAACACCGGATCGTTCAGGCGAAATTGCA    150

BSNT_05181___    151 GAGGATTATGCAAAACGGGATGCGAGAATCCGGGTCATTCATCAGGCAAA    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    151 GAGGACTATGCAAAACGGGATGCGAGAATCCGGGTCATTCATCAGGCAAA    200

BSNT_05181___    201 CGGCGGGCTTAGTTCAGCGCGAAATACGGGAATAAAGGCCGCGCGGGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    201 CGGCGGGCTTAGTTCAGCGCGAAATACGGGAATAAAGGCCGCGCGGGGCA    250

BSNT_05181___    251 CTTACATCGGCTTTGTAGACGGAGACGATTATGTATCATCCGCCATGTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    251 CTTACATCGGCTTTGTAGACGGAGACGATTATGTATCATCCGCCATGTTC    300

BSNT_05181___    301 CAGAGACTGGCTGAAGAAGCGGAGGAAAATCGGCTCGACATCGTCGGATG    350
                     |||||.|||.||||||||||||||.||||||.|||.||||||||||||||
BSU34280___ep    301 CAGAGGCTGACTGAAGAAGCGGAGCAAAATCAGCTTGACATCGTCGGATG    350

BSNT_05181___    351 CGGTTTTTACAAACAGTCATCGGACAGGCGGACATATGTGCCGCCGCAGC    400
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34280___ep    351 CGGTTTTTACAAGCAGTCATCGGACAGGCGGACATATGTGCCGCCGCAGC    400

BSNT_05181___    401 TTGAGGCAAACCGCGTGCTGACGAAACCAGAAATGACTGAACGGCTTAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU34280___ep    401 TTGAGGCAAACCGCGTGCTGACGAAACCAGAAATGACTGAACAGCTTAAA    450

BSNT_05181___    451 CATGCTCACGAAACGAGATTTATCTGGTATGTATGGCGTTATCTTTACCG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    451 CATGCTCACGAAACGAGATTTATCTGGTATGTATGGCGTTATCTTTACCG    500

BSNT_05181___    501 CCGTGAGCTTTTTGATAGGGCGAATCTGATGTTTGATGAAGACATCCGTT    550
                     .||||||||||||||.||||||||||||.|||||||||||||||||||||
BSU34280___ep    501 TCGTGAGCTTTTTGAAAGGGCGAATCTGCTGTTTGATGAAGACATCCGTT    550

BSNT_05181___    551 TTGCCGAAGACTCTCCCTTCAATTTGTCCGCTTTTTGCGAAGCGGAGCGG    600
                     ||||.||||||||||||||.|||||||||||||||.||||||||||||||
BSU34280___ep    551 TTGCTGAAGACTCTCCCTTTAATTTGTCCGCTTTTCGCGAAGCGGAGCGG    600

BSNT_05181___    601 GTGAAAATGCTTGATGAGGGATTGTACATTTATCGTGAAAACCCGAACAG    650
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU34280___ep    601 GTGAAAATGCTTGATGAAGGATTGTACATTTATCGTGAAAACCCGAACAG    650

BSNT_05181___    651 CCTGACAGAAATCCCTTATAAACCGGCGATGGATGAACATCTTCAAAAAC    700
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34280___ep    651 CCTGACAGAAATCCCTTATAAGCCGGCGATGGATGAACATCTTCAAAAAC    700

BSNT_05181___    701 AATATCAAGCTAAAATCGCATTCTACAATCACTATGGCTTAGCAGGCGCA    750
                     |||||||.||||||||||||||||||||||||||.|||||||||||||||
BSU34280___ep    701 AATATCAGGCTAAAATCGCATTCTACAATCACTACGGCTTAGCAGGCGCA    750

BSNT_05181___    751 TGCCAAGAAGATTTGAATGTGTACATTTGCAGGCACCAGCTTCCGATGCT    800
                     ||..||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    751 TGTAAAGAAGATTTGAATGTGTACATTTGCAGGCACCAGCTTCCGATGCT    800

BSNT_05181___    801 TTTGGCAAATGCCTGTGCTTCTCCGAATTCGCCGAAAGACATCAAAAAGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    801 TTTGGCAAATGCCTGTGCTTCTCCGAATTCGCCGAAAGACATCAAAAAGA    850

BSNT_05181___    851 AGATCAGACAGATTTTATCCTATGACATGGTGCGGCAGGCTGTCAGACAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34280___ep    851 AGATCAGACAGATTTTATCCTATGACATGGTGCGGCAGGCTGTCAGACAT    900

BSNT_05181___    901 ACACCGTT------TGAGAAATTATTAAGAGGAGAGCGCTTGGTATTAGC    944
                     ||||||||      ||||||||||||||||||||||||.|||||||||||
BSU34280___ep    901 ACACCGTTTCAGCATGAGAAATTATTAAGAGGAGAGCGTTTGGTATTAGC    950

BSNT_05181___    945 ACTGTGTAAATGGCGGCTCACTTTTCTCATCAAGCTGTTTTTCGAGCATC    994
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU34280___ep    951 ACTGTGTAAATGGCGGCTCACTTTTCTCATCAAGCTGTTTTTCGAGCAGC   1000

BSNT_05181___    995 GGGGGATAATGAAAGGCAGTGCGAAGCAAGCATGA   1029
                     ||||||.|||||||||||||||||||||.||||||
BSU34280___ep   1001 GGGGGACAATGAAAGGCAGTGCGAAGCAGGCATGA   1035


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05181 and BSU34280

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
