Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05170 and BSU34200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_05170___sigL.1.22522.seq
# -bsequence dna-align/BSU34200___sigL.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05170___sigL-BSU34200___sigL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05170___sigL-BSU34200___sigL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05170___sigL
# 2: BSU34200___sigL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1314
# Identity: 1293/1314 (98.4%)
# Similarity: 1293/1314 (98.4%)
# Gaps: 3/1314 ( 0.2%)
# Score: 6393.0
#
#
#=======================================
BSNT_05170___ 1 ATGATGGATATGAAACTTCAGCAAGTACAAGTATTAAAGCCTCAACTGAC 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 1 ---ATGGATATGAAACTTCAGCAAGTACAAGTATTAAAGCCTCAACTGAC 47
BSNT_05170___ 51 ACAGGAGCTCAGGCAGGCCATCACGCTGCTTGGCTATCATTCGGCAGAAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 48 ACAGGAGCTCAGGCAGGCCATCACGCTGCTTGGCTATCATTCGGCAGAAC 97
BSNT_05170___ 101 TCGCCGAGTACATTGATGAGCTCTCACTGGAAAACCCTCTTATTGAACGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 98 TCGCCGAGTACATTGATGAGCTCTCACTGGAAAACCCTCTTATTGAACGA 147
BSNT_05170___ 151 AAGGAAACAGACACACCGCCACTATCTTACCATAAAACAAACAAAAACAG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 148 AAGGAAACAGACACACCGCCACTATCTTACCATAAAACAAACAAAAACAG 197
BSNT_05170___ 201 GATGAATGCACAGGAAGCGGGCCTTCAATTAAGTAATCCGCAAAAAACAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 198 GATGAATGCACAGGAAGCGGGCCTTCAATTAAGTAATCCGCAAAAAACAT 247
BSNT_05170___ 251 TGCAGGATGCGTTAAAACAGCAGTCACTCGATATGAATCTGACCAACACT 300
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU34200___si 248 TGCAGGATGCGTTAAAACAGCAGTCACTCGATATGAATCTGACAAACACT 297
BSNT_05170___ 301 GAAAAAAAGATTTTTAATTATCTGATTCATTCGCTTGATTCAAACGGGTA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 298 GAAAAAAAGATTTTTAATTATCTGATTCATTCGCTTGATTCAAACGGGTA 347
BSNT_05170___ 351 CTTGGAAGAAGATGTGGAGGAGGCAGCACGGCGCCTATCTGTATCGGCTA 400
|||||||||||||.|.|||||||||||||||||..|||||||||||||.|
BSU34200___si 348 CTTGGAAGAAGATATAGAGGAGGCAGCACGGCGATTATCTGTATCGGCCA 397
BSNT_05170___ 401 AGGAAACGGAGGCTGTTTTGGCAAAACTCCAGTCGTTAGAACCGGCTGGA 450
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 398 AGGAAGCGGAGGCTGTTTTGGCAAAACTCCAGTCGTTAGAACCGGCTGGA 447
BSNT_05170___ 451 ATCGGCGCGAGATCTTTGCAGGAATGCATCCTTCTTCAATTACAGCGGCT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 448 ATCGGCGCGAGATCTTTGCAGGAATGCATCCTTCTTCAATTACAGCGGCT 497
BSNT_05170___ 501 GCCGAACAGAAATGAACAAGCGGAAATGCTGGTTTCAGCTCATTTTGATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 498 GCCGAACAGAAATGAACAAGCGGAAATGCTGGTTTCAGCTCATTTTGATG 547
BSNT_05170___ 551 CTTTTGCACAAAAAAAATGGAAAGCGCTTTCAGTGGAGACAGGAATTCCG 600
|||||||.|||||||||||||||.||||||||||.|||||.|||||||||
BSU34200___si 548 CTTTTGCGCAAAAAAAATGGAAAACGCTTTCAGTAGAGACGGGAATTCCG 597
BSNT_05170___ 601 CTTCATACTATTCAAGATATCTCAGATGATATCGCGGCTCTTCATCCTAG 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU34200___si 598 CTTCATACCATTCAAGATATCTCAGATGATATCGCGGCTCTTCATCCTAG 647
BSNT_05170___ 651 ACCTGGCCTTCTGTTTGCCCGGCCAGAGCAAGATGTGTATATTGAGCCTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 648 ACCTGGCCTTCTGTTTGCCCGGCCAGAGCAAGATGTGTATATTGAGCCTG 697
BSNT_05170___ 701 ATATTTTTATCACCGTAAAAAACGGGCACATTGCAGCGGAACTGAATACC 750
|.||||||||||||||||||||.||||||||.||||||||||||||||||
BSU34200___si 698 ACATTTTTATCACCGTAAAAAATGGGCACATCGCAGCGGAACTGAATACC 747
BSNT_05170___ 751 CGCTCGTTTCCCGAGATCGATCTGCATCCGCAGTACAGAACGCTTTTATC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 748 CGCTCGTTTCCCGAGATCGATCTGCATCCGCAGTACAGAACGCTTTTATC 797
BSNT_05170___ 801 ATCCGGCTCCTGTCAGGATACTGTCTCCTATTTATCTGCGAAATATCAGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 798 ATCCGGCTCCTGTCAGGATACTGTCTCCTATTTATCTGCGAAATATCAGG 847
BSNT_05170___ 851 AGTGGCGCTGGCTGAGCCGCGCGCTGCGGCAGCGAAAACAGACAATCACG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 848 AGTGGCGCTGGCTGAGCCGCGCGCTGCGGCAGCGAAAACAGACAATCACG 897
BSNT_05170___ 901 AGAATTATCAATGAACTGATCACACGCCAAAAGGATTTCTTTCTGAAAGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 898 AGAATTATCAATGAACTGATCACACGCCAAAAGGATTTCTTTCTGAAAGG 947
BSNT_05170___ 951 GCGAAGCGCAATGAAGCCGCTGACTCTCAGAGAGGTGGCGGACTGTCTAA 1000
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34200___si 948 GCGAAGCGCAATGAAGCCGCTGACTCTCAGAGAGGTGGCAGACTGTCTAA 997
BSNT_05170___ 1001 GCCTTCATGAATCAACTGTGAGCCGGGCCATTAAAGGGAAAACAATACAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 998 GCCTTCATGAATCAACTGTGAGCCGGGCCATTAAAGGGAAAACAATACAA 1047
BSNT_05170___ 1051 ACGCCTTACGGGCTGTTTGAGATGAAACTCTTTTTCTCAGCAAAAGCCGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 1048 ACGCCTTACGGGCTGTTTGAGATGAAACTCTTTTTCTCAGCAAAAGCCGA 1097
BSNT_05170___ 1101 GGCTTCAGGTGATGGAGATGCGTCGAATTATGCAGTCAAAACGCATCTGG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 1098 GGCTTCAGGTGATGGAGATGCGTCGAATTATGCAGTCAAAACGCATCTGG 1147
BSNT_05170___ 1151 AAAACCTGATCAATCAAGAGGACAAAACAAAACCGCTTTCAGACCAAAAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si 1148 AAAACCTGATCAATCAAGAGGACAAAACAAAACCGCTTTCAGACCAAAAG 1197
BSNT_05170___ 1201 CTTGTCGATTTGCTGTATGAACAACATGGCATCCAAATCTCGAGACGCAC 1250
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34200___si 1198 CTTGTCGATTTGCTGTATGAACAACACGGCATCCAAATCTCGAGACGCAC 1247
BSNT_05170___ 1251 CGTGGCAAAATATCGCGACCAAATGAATATTCCGTCATCGGCAGCGAGAA 1300
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34200___si 1248 CGTGGCAAAATATCGCGATCAAATGAATATTCCGTCATCGGCAGCGAGAA 1297
BSNT_05170___ 1301 AGCGATATAAATAA 1314
||||||||||||||
BSU34200___si 1298 AGCGATATAAATAA 1311
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