Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05170 and BSU34200

See Amino acid alignment / Visit BSNT_05170 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence dna-align/BSNT_05170___sigL.1.22522.seq
#    -bsequence dna-align/BSU34200___sigL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05170___sigL-BSU34200___sigL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05170___sigL-BSU34200___sigL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05170___sigL
# 2: BSU34200___sigL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1314
# Identity:    1293/1314 (98.4%)
# Similarity:  1293/1314 (98.4%)
# Gaps:           3/1314 ( 0.2%)
# Score: 6393.0
# 
#
#=======================================

BSNT_05170___      1 ATGATGGATATGAAACTTCAGCAAGTACAAGTATTAAAGCCTCAACTGAC     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si      1 ---ATGGATATGAAACTTCAGCAAGTACAAGTATTAAAGCCTCAACTGAC     47

BSNT_05170___     51 ACAGGAGCTCAGGCAGGCCATCACGCTGCTTGGCTATCATTCGGCAGAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si     48 ACAGGAGCTCAGGCAGGCCATCACGCTGCTTGGCTATCATTCGGCAGAAC     97

BSNT_05170___    101 TCGCCGAGTACATTGATGAGCTCTCACTGGAAAACCCTCTTATTGAACGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si     98 TCGCCGAGTACATTGATGAGCTCTCACTGGAAAACCCTCTTATTGAACGA    147

BSNT_05170___    151 AAGGAAACAGACACACCGCCACTATCTTACCATAAAACAAACAAAAACAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    148 AAGGAAACAGACACACCGCCACTATCTTACCATAAAACAAACAAAAACAG    197

BSNT_05170___    201 GATGAATGCACAGGAAGCGGGCCTTCAATTAAGTAATCCGCAAAAAACAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    198 GATGAATGCACAGGAAGCGGGCCTTCAATTAAGTAATCCGCAAAAAACAT    247

BSNT_05170___    251 TGCAGGATGCGTTAAAACAGCAGTCACTCGATATGAATCTGACCAACACT    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU34200___si    248 TGCAGGATGCGTTAAAACAGCAGTCACTCGATATGAATCTGACAAACACT    297

BSNT_05170___    301 GAAAAAAAGATTTTTAATTATCTGATTCATTCGCTTGATTCAAACGGGTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    298 GAAAAAAAGATTTTTAATTATCTGATTCATTCGCTTGATTCAAACGGGTA    347

BSNT_05170___    351 CTTGGAAGAAGATGTGGAGGAGGCAGCACGGCGCCTATCTGTATCGGCTA    400
                     |||||||||||||.|.|||||||||||||||||..|||||||||||||.|
BSU34200___si    348 CTTGGAAGAAGATATAGAGGAGGCAGCACGGCGATTATCTGTATCGGCCA    397

BSNT_05170___    401 AGGAAACGGAGGCTGTTTTGGCAAAACTCCAGTCGTTAGAACCGGCTGGA    450
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    398 AGGAAGCGGAGGCTGTTTTGGCAAAACTCCAGTCGTTAGAACCGGCTGGA    447

BSNT_05170___    451 ATCGGCGCGAGATCTTTGCAGGAATGCATCCTTCTTCAATTACAGCGGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    448 ATCGGCGCGAGATCTTTGCAGGAATGCATCCTTCTTCAATTACAGCGGCT    497

BSNT_05170___    501 GCCGAACAGAAATGAACAAGCGGAAATGCTGGTTTCAGCTCATTTTGATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    498 GCCGAACAGAAATGAACAAGCGGAAATGCTGGTTTCAGCTCATTTTGATG    547

BSNT_05170___    551 CTTTTGCACAAAAAAAATGGAAAGCGCTTTCAGTGGAGACAGGAATTCCG    600
                     |||||||.|||||||||||||||.||||||||||.|||||.|||||||||
BSU34200___si    548 CTTTTGCGCAAAAAAAATGGAAAACGCTTTCAGTAGAGACGGGAATTCCG    597

BSNT_05170___    601 CTTCATACTATTCAAGATATCTCAGATGATATCGCGGCTCTTCATCCTAG    650
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU34200___si    598 CTTCATACCATTCAAGATATCTCAGATGATATCGCGGCTCTTCATCCTAG    647

BSNT_05170___    651 ACCTGGCCTTCTGTTTGCCCGGCCAGAGCAAGATGTGTATATTGAGCCTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    648 ACCTGGCCTTCTGTTTGCCCGGCCAGAGCAAGATGTGTATATTGAGCCTG    697

BSNT_05170___    701 ATATTTTTATCACCGTAAAAAACGGGCACATTGCAGCGGAACTGAATACC    750
                     |.||||||||||||||||||||.||||||||.||||||||||||||||||
BSU34200___si    698 ACATTTTTATCACCGTAAAAAATGGGCACATCGCAGCGGAACTGAATACC    747

BSNT_05170___    751 CGCTCGTTTCCCGAGATCGATCTGCATCCGCAGTACAGAACGCTTTTATC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    748 CGCTCGTTTCCCGAGATCGATCTGCATCCGCAGTACAGAACGCTTTTATC    797

BSNT_05170___    801 ATCCGGCTCCTGTCAGGATACTGTCTCCTATTTATCTGCGAAATATCAGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    798 ATCCGGCTCCTGTCAGGATACTGTCTCCTATTTATCTGCGAAATATCAGG    847

BSNT_05170___    851 AGTGGCGCTGGCTGAGCCGCGCGCTGCGGCAGCGAAAACAGACAATCACG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    848 AGTGGCGCTGGCTGAGCCGCGCGCTGCGGCAGCGAAAACAGACAATCACG    897

BSNT_05170___    901 AGAATTATCAATGAACTGATCACACGCCAAAAGGATTTCTTTCTGAAAGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    898 AGAATTATCAATGAACTGATCACACGCCAAAAGGATTTCTTTCTGAAAGG    947

BSNT_05170___    951 GCGAAGCGCAATGAAGCCGCTGACTCTCAGAGAGGTGGCGGACTGTCTAA   1000
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34200___si    948 GCGAAGCGCAATGAAGCCGCTGACTCTCAGAGAGGTGGCAGACTGTCTAA    997

BSNT_05170___   1001 GCCTTCATGAATCAACTGTGAGCCGGGCCATTAAAGGGAAAACAATACAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si    998 GCCTTCATGAATCAACTGTGAGCCGGGCCATTAAAGGGAAAACAATACAA   1047

BSNT_05170___   1051 ACGCCTTACGGGCTGTTTGAGATGAAACTCTTTTTCTCAGCAAAAGCCGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si   1048 ACGCCTTACGGGCTGTTTGAGATGAAACTCTTTTTCTCAGCAAAAGCCGA   1097

BSNT_05170___   1101 GGCTTCAGGTGATGGAGATGCGTCGAATTATGCAGTCAAAACGCATCTGG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si   1098 GGCTTCAGGTGATGGAGATGCGTCGAATTATGCAGTCAAAACGCATCTGG   1147

BSNT_05170___   1151 AAAACCTGATCAATCAAGAGGACAAAACAAAACCGCTTTCAGACCAAAAG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34200___si   1148 AAAACCTGATCAATCAAGAGGACAAAACAAAACCGCTTTCAGACCAAAAG   1197

BSNT_05170___   1201 CTTGTCGATTTGCTGTATGAACAACATGGCATCCAAATCTCGAGACGCAC   1250
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34200___si   1198 CTTGTCGATTTGCTGTATGAACAACACGGCATCCAAATCTCGAGACGCAC   1247

BSNT_05170___   1251 CGTGGCAAAATATCGCGACCAAATGAATATTCCGTCATCGGCAGCGAGAA   1300
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34200___si   1248 CGTGGCAAAATATCGCGATCAAATGAATATTCCGTCATCGGCAGCGAGAA   1297

BSNT_05170___   1301 AGCGATATAAATAA   1314
                     ||||||||||||||
BSU34200___si   1298 AGCGATATAAATAA   1311


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.