Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05168 and BSU34180

See Amino acid alignment / Visit BSNT_05168 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence dna-align/BSNT_05168.1.22522.seq
#    -bsequence dna-align/BSU34180___yvfI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05168-BSU34180___yvfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05168-BSU34180___yvfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05168
# 2: BSU34180___yvfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity:     655/723 (90.6%)
# Similarity:   655/723 (90.6%)
# Gaps:          63/723 ( 8.7%)
# Score: 3255.0
# 
#
#=======================================

BSNT_05168         1 TTGAAATACAAACAGATTAAAACAAAAAAAATATATGAAGAAGTAGCGGA     50
                                                                       
BSU34180___yv      0 --------------------------------------------------      0

BSNT_05168        51 TGCACTATTAGATATGATCAAAAACGGCGAATTGAAGCCTGGGGATAAAC    100
                                  |||||||||||.||||||||||||||.||||||||||
BSU34180___yv      1 -------------ATGATCAAAAATGGCGAATTGAAGCCGGGGGATAAAC     37

BSNT_05168       101 TGGACTCTGTTCAGGCGCTTGCTGAGAGCTTTCAAGTCAGCCGTTCAGCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv     38 TGGACTCTGTTCAGGCGCTTGCTGAGAGCTTTCAAGTCAGCCGTTCAGCG     87

BSNT_05168       151 GTTCGCGAAGCACTTTCTGCGCTAAAGGCGATGGGGCTTGTCGAAATGAA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34180___yv     88 GTTCGCGAAGCACTTTCTGCGCTAAAAGCGATGGGGCTTGTCGAAATGAA    137

BSNT_05168       201 ACAGGGAGAAGGCACGTATCTGAAGGAATTTGAGCTCAATCAAATTTCTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    138 ACAGGGAGAAGGCACGTATCTGAAGGAATTTGAGCTCAATCAAATTTCTC    187

BSNT_05168       251 AGCCGCTCTCAGCCGCCCTTCTGATGAAAAAAGAGGACGTCAAGCAGCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    188 AGCCGCTCTCAGCCGCCCTTCTGATGAAAAAAGAGGACGTCAAGCAGCTG    237

BSNT_05168       301 CTCGAGGTCAGAAAACTGCTTGAAATCGGCGTGGCTTCACTAGCGGCTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    238 CTCGAGGTCAGAAAACTGCTTGAAATCGGCGTGGCTTCACTAGCGGCTGA    287

BSNT_05168       351 AAAAAGGACAGAAGCAGATCTCAAAAGAATTCATGATGCACTAAAGGAAA    400
                     ||||||||||||||||||||||.||||||||||.||||||||||||||||
BSU34180___yv    288 AAAAAGGACAGAAGCAGATCTCGAAAGAATTCAGGATGCACTAAAGGAAA    337

BSNT_05168       401 TGGGCAGCATTGAAGCGGACGGGGAGCTGGGAGAGAAAGCAGACTTTGCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    338 TGGGCAGCATTGAAGCGGACGGGGAGCTGGGAGAGAAAGCAGACTTTGCA    387

BSNT_05168       451 TTTCATCTTGCGCTTGCGGACGCTTCTCAAAATGAACTTCTTAAACACTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    388 TTTCATCTTGCGCTTGCGGACGCTTCTCAAAATGAACTTCTTAAACACTT    437

BSNT_05168       501 GATGAATCACGTGTCATCATTGCTGCTGGAAACAATGAGGGAAACGAGGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    438 GATGAATCACGTGTCATCATTGCTGCTGGAAACAATGAGGGAAACGAGGA    487

BSNT_05168       551 AAATCTGGCTGTTTTCCAAGAAGACCTCCGTTCAGCGGCTGTATGAGGAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    488 AAATCTGGCTGTTTTCCAAGAAGACCTCCGTTCAGCGGCTGTATGAGGAG    537

BSNT_05168       601 CACGAACGGATTTACAATGCTGTGGCTGCCGGGAACGGTGCACAGGCGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    538 CACGAACGGATTTACAATGCTGTGGCTGCCGGGAACGGTGCACAGGCGGA    587

BSNT_05168       651 AGCCGCCATGCTGGCGCATTTGACGAATGTGGAAGATGTGCTTTCGGGAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34180___yv    588 AGCCGCCATGCTGGCGCATTTGACGAATGTGGAAGATGTGCTTTCGGGAT    637

BSNT_05168       701 ATTTCGAGGAAAATGTGCAATAA    723
                     |||||||||||||||||||||||
BSU34180___yv    638 ATTTCGAGGAAAATGTGCAATAA    660


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