Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05146 and BSU34020

See Amino acid alignment / Visit BSNT_05146 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence dna-align/BSNT_05146.1.22522.seq
#    -bsequence dna-align/BSU34020___yvbX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05146-BSU34020___yvbX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05146-BSU34020___yvbX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05146
# 2: BSU34020___yvbX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1035
# Identity:     776/1035 (75.0%)
# Similarity:   776/1035 (75.0%)
# Gaps:         246/1035 (23.8%)
# Score: 3828.0
# 
#
#=======================================

BSNT_05146         1 ATGAAAAAATGGCTGATCATAGCGGTTTCACTGGCGATTGCGATTGTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv      1 ATGAAAAAATGGCTGATCATAGCGGTTTCACTGGCGATTGCGATTGTTCT     50

BSNT_05146        51 GTTTATCTATACAAAAGGAGAAGCGAAGGCAGCCGGAATGACACTAGGCT    100
                     ||||||.|||||||||||||||||||||||||||||.||||||.||||||
BSU34020___yv     51 GTTTATGTATACAAAAGGAGAAGCGAAGGCAGCCGGTATGACAGTAGGCT    100

BSNT_05146       101 ACACGACTGGGGATACGGCTTCATACAATTCTCTTACAAAATATCATACA    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU34020___yv    101 ACACGACTGGGGATACGGCTTCATACAATTCTCTTACGAAATATCATACA    150

BSNT_05146       151 TACATGAATGCCATCGCAACCGATACGTTTGCGTTTGAAAAAAACGGACA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34020___yv    151 TACATGAATGCCATCGCAACCGATACATTTGCGTTTGAAAAAAACGGACA    200

BSNT_05146       201 TGTGATTGGCGATGCCCCAACTAAGCAGCTGACATATGCGAAAAAGAAAA    250
                     ..|.||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    201 AATCATTGGCGATGCCCCAACTAAGCAGCTGACATATGCGAAAAAGAAAA    250

BSNT_05146       251 AAATCAAGACATGGGCTGTCATTTCAAACTATAATGATGCCATTTATGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    251 AAATCAAGACATGGGCTGTCATTTCAAACTATAATGATGCCATTTATGAT    300

BSNT_05146       301 TTTGACGGAGATTTAGCGAGTCGGGTCATGAGTAATAAAACAGCGAAAAA    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU34020___yv    301 TTTGACGGAGATTTAGCGAGTCGGGTCATGAGCAATAAAACAGCGAAAAA    350

BSNT_05146       351 ACGATTCACAGATCAGTTAATAACACTGGCCAAAAAGCACTCATATTACG    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34020___yv    351 ACGATTCACAGATCAGTTAATTACACTGGCCAAAAAGCACTCATATTACG    400

BSNT_05146       401 GAATTAATATCGATTTTGAAGCAGTAAATCCAGAAGACCGCGCTGCATAC    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    401 GAATCAATATCGATTTTGAAGCAGTAAATCCAGAAGACCGCGCTGCATAC    450

BSNT_05146       451 TCGAACTTCATTCAATATGTCTCACAGGCTTTGAATAAGAAACATATTAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    451 TCGAACTTCATTCAATATGTCTCACAGGCTTTGAATAAGAAACATATTAA    500

BSNT_05146       501 AACAATGGTATCCGTTCCGGCCAAAAGCGCCGATGATAAAAATGATGACT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    501 AACAATGGTATCCGTTCCGGCCAAAAGCGCCGATGATAAAAATGATGACT    550

BSNT_05146       551 GGAGCTGGCCGTATGATTATGCGAAAATCGGCAAATATGCCGACTTCGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    551 GGAGCTGGCCGTATGATTATGCGAAAATCGGCAAATATGCCGACTTCGTA    600

BSNT_05146       601 CAAGTCATGACCTACGATGAACACGGCATTTGGGGTGAGCCGGGGTCAGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    601 CAAGTCATGACCTACGATGAACACGGCATTTGGGGTGAGCCGGGGTCAGT    650

BSNT_05146       651 GGCAAGCACAAACTGGATCAAAAGCTCTCTGCAGTTTTCAGTCAAAAAGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    651 GGCAAGCACAAACTGGATCAAAAGCTCTCTGCAGTTTTCAGTCAAAAAGA    700

BSNT_05146       701 TCAAAGCCAATAAAGTCATCATGGGAATCCCTGCGTACGGCTATGACTGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34020___yv    701 TCAAAGCCAATAAAGTCATCATGGGAATCCCTGCGTACGGCTATGACTGG    750

BSNT_05146       751 GATGTAAAAGACGGAAGTAACAGCACAATAAGGGAATGA-----------    789
                     |||||||||||||||||||.||||||||||||||||||.           
BSU34020___yv    751 GATGTAAAAGACGGAAGTACCAGCACAATAAGGGAATGGAATGAGCTCAA    800

BSNT_05146       789 --------------------------------------------------    789
                                                                       
BSU34020___yv    801 ATCCCTCATCAAAAAACAAAAAGCAAAGCCGGCATTCAACAAAAAATCAG    850

BSNT_05146       789 --------------------------------------------------    789
                                                                       
BSU34020___yv    851 GCTCGATGACGTTTTCTTATGTTGACAAAAAGAAGCATAAACATGTCGTG    900

BSNT_05146       789 --------------------------------------------------    789
                                                                       
BSU34020___yv    901 TGGTATGAAAACGAAAAAACCGTTCAAACGAAAAGCCATCTGGCAAAGCA    950

BSNT_05146       789 --------------------------------------------------    789
                                                                       
BSU34020___yv    951 ATATAAAATAGCAGGTGTTTCAGTTTACGCATTAGGAAACGAGTCAGAAT   1000

BSNT_05146       789 -----------------------------------    789
                                                        
BSU34020___yv   1001 CCTTTTGGAAAGCCATTCGAAAAGGGACAAAATAA   1035


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.