Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05139 and BSU33980

See Amino acid alignment / Visit BSNT_05139 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence dna-align/BSNT_05139___yvbT.1.22522.seq
#    -bsequence dna-align/BSU33980___yvbT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05139___yvbT-BSU33980___yvbT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05139___yvbT-BSU33980___yvbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05139___yvbT
# 2: BSU33980___yvbT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1011
# Identity:    1005/1011 (99.4%)
# Similarity:  1005/1011 (99.4%)
# Gaps:           0/1011 ( 0.0%)
# Score: 5001.0
# 
#
#=======================================

BSNT_05139___      1 ATGTCTAACAACCAACGCAAAGATACCTTGCTTTCTGTCTTGAATTTATC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv      1 ATGTCTAACAACCAACGCAAAGATACCTTGCTTTCTGTCTTGAATTTATC     50

BSNT_05139___     51 TCCGGTTGTTCAGGGAGGAACGATTGCAGAATCATTCCGAAACAGCATGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv     51 TCCGGTTGTTCAGGGAGGAACGATTGCAGAATCATTCCGAAACAGCATGG    100

BSNT_05139___    101 ACTTGGCGCGCCGGGCAGAGGAATGGGGCTATCACCGTTACTGGCTTGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    101 ACTTGGCGCGCCGGGCAGAGGAATGGGGCTATCACCGTTACTGGCTTGCT    150

BSNT_05139___    151 GAACATCATAATATAGAAGGTGTTGCAAGCTCTGCCACCGCAGTTTTGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    151 GAACATCATAATATAGAAGGTGTTGCAAGCTCTGCCACCGCAGTTTTGAT    200

BSNT_05139___    201 TGGCCATATTGCCGGAGGCACGAAGAAAATCCGCGTCGGTTCCGGCGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    201 TGGCCATATTGCCGGAGGCACGAAGAAAATCCGCGTCGGTTCCGGCGGCA    250

BSNT_05139___    251 TTATGCTCCCGAACCACTCTTCATTAGTCATTGCTGAACAATTCGGCACA    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU33980___yv    251 TTATGCTCCCCAACCACTCTTCATTAGTCATTGCTGAACAATTCGGCACA    300

BSNT_05139___    301 CTGGAAACACTGTATCCCGGGCGGATTGATCTGGGGCTTGGACGTGCGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    301 CTGGAAACACTGTATCCCGGGCGGATTGATCTGGGGCTTGGACGTGCGCC    350

BSNT_05139___    351 GGGAACAGACCAATTGACAGCCAGAGCGCTCCGAAGAAACATCAACAGCG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU33980___yv    351 GGGAACAGACCAATTGACAGCCAGAGCGCTCCGCAGAAACATCAACAGCG    400

BSNT_05139___    401 GTGAGGATTTTCCAGAACAATTAGAGGAACTGCGCAATTATTTTAAACCG    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    401 GGGAGGATTTTCCAGAACAATTAGAGGAACTGCGCAATTATTTTAAACCG    450

BSNT_05139___    451 TCAGGAAATGTGCGCAATCAAGTTCGCGCCATTCCCGGAGAGGGCATAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    451 TCAGGAAATGTGCGCAATCAAGTTCGCGCCATTCCCGGAGAGGGCATAGA    500

BSNT_05139___    501 TGTGCCGATTTGGCTGCTGGGCTCAAGCGGCTTCAGCGCCCGTCTGGCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    501 TGTGCCGATTTGGCTGCTGGGCTCAAGCGGCTTCAGCGCCCGTCTGGCTG    550

BSNT_05139___    551 GCGAACTTGGTCTTCCGTTTGCGTTCGCGGCCCATTTCTCACCGGCGAAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    551 GCGAACTTGGTCTTCCGTTTGCGTTCGCGGCCCATTTCTCACCGGCGAAT    600

BSNT_05139___    601 ACGGTTCCCGCTTTGGAGCTGTACCGCAATTCCTTCACGCCGTCAGACGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    601 ACGGTTCCCGCTTTGGAGCTGTACCGCAATTCCTTCACGCCGTCAGACGT    650

BSNT_05139___    651 GCTCGACGAACCGTATGCGATGGTCGGTGTCACCATTATCGCGGCAGATA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    651 GCTCGACGAACCGTATGCGATGGTCGGTGTCACCATTATCGCGGCAGATA    700

BSNT_05139___    701 CAAACGAGAAAGCGCAGCACCTTGCGACTTCGCATTATCAAAGGTTTCTT    750
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU33980___yv    701 CAAACGAGAAAGCGCAGCACCTTGCGACTTCCCATTATCAAAGGTTTCTT    750

BSNT_05139___    751 GATCTTGTCCGCGGTACGCCGAACCAGCTTAAACCGCCTGTTGAGGATAT    800
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU33980___yv    751 GATCTTGTCCGCGGTACGCCTAACCAGCTTAAACCGCCTGTTGAGGATAT    800

BSNT_05139___    801 GGACCAAATCTGGAGCCCGTATGAAAAAGCGATGGTCAATGAGCAGCTGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    801 GGACCAAATCTGGAGCCCGTATGAAAAAGCGATGGTCAATGAGCAGCTGA    850

BSNT_05139___    851 GCTCCACGATTGTCGGAGGTCCGGAAGAAGTGAAGGCGAAGCTTGAAGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    851 GCTCCACGATTGTCGGAGGTCCGGAAGAAGTGAAGGCGAAGCTTGAAGAT    900

BSNT_05139___    901 TTCGTCAAAACGACACAGGCTGACGAAATTATGGTTAACTCAGAAACCTT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    901 TTCGTCAAAACGACACAGGCTGACGAAATTATGGTTAACTCAGAAACCTT    950

BSNT_05139___    951 TGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33980___yv    951 TGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGA   1000

BSNT_05139___   1001 ACAACAGATAA   1011
                     |.|||||||||
BSU33980___yv   1001 AAAACAGATAA   1011


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05139 and BSU33980

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
