Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05138 and BSU33970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_05138___araR.1.22522.seq
# -bsequence dna-align/BSU33970___araR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05138___araR-BSU33970___araR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05138___araR-BSU33970___araR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05138___araR
# 2: BSU33970___araR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1155
# Identity: 1084/1155 (93.9%)
# Similarity: 1084/1155 (93.9%)
# Gaps: 66/1155 ( 5.7%)
# Score: 5400.0
#
#
#=======================================
BSNT_05138___ 0 -------------------------------------------------- 0
BSU33970___ar 1 ATGTTTTCTTACAAAGAACGCTGTGATATACTGAAATTTGTCCGTATACA 50
BSNT_05138___ 1 ----------------ATGTTACCAAAATACGCGCAAGTAAAAGAAGAAA 34
||||||||||||||||||||||||||||||||||
BSU33970___ar 51 TTTTGGAGGAATGGATATGTTACCAAAATACGCGCAAGTAAAAGAAGAAA 100
BSNT_05138___ 35 TCAGTTCATGGATTAATCAAGGCAAAATACTGCCCGATCAAAAAATCCCT 84
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 101 TCAGTTCTTGGATTAATCAAGGCAAAATACTGCCCGATCAAAAAATCCCT 150
BSNT_05138___ 85 ACCGAAAACGAATTAATGCAGCAATTCGGCGTCAGCCGGCATACCATCCG 134
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 151 ACCGAAAACGAATTAATGCAGCAATTCGGCGTCAGCCGGCATACCATCCG 200
BSNT_05138___ 135 CAAAGCGATCGGAGACCTCGTATCACAAGGTCTGCTGTACAGCGTGCAAG 184
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 201 CAAAGCGATCGGAGACCTCGTATCACAAGGTCTGCTGTACAGCGTGCAAG 250
BSNT_05138___ 185 GCGGAGGCACCTTTGTCGCTTCACGCTCTGCTAAGTCAGCGCTGCATTCC 234
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 251 GCGGAGGCACCTTTGTCGCTTCACGCTCTGCTAAGTCAGCGCTGCATTCC 300
BSNT_05138___ 235 AATAAAACGATCGGTGTTTTGACAACCTACATATCAGACTATATTTTCCC 284
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33970___ar 301 AATAAAACGATCGGTGTTTTGACAACTTACATATCAGACTATATTTTCCC 350
BSNT_05138___ 285 GAGCATCATCAGAGGAATCGAGTCCTATTTAAGCGAGCAGGGGTATTCTA 334
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 351 GAGCATCATCAGAGGAATCGAGTCCTATTTAAGCGAGCAGGGGTATTCTA 400
BSNT_05138___ 335 TGCTTTTGACAAGCACAAACAACAACCCGGACAACGAAAGAAGAGGCTTA 384
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU33970___ar 401 TGCTTTTGACAAGCACAAACAACAACCCGGACAATGAAAGAAGAGGCTTA 450
BSNT_05138___ 385 GAAAACCTGCTGTCCCAGCATATTGACGGACTCATCGTAGAACCGACAAA 434
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 451 GAAAACCTGCTGTCCCAGCATATTGACGGACTCATCGTAGAACCGACAAA 500
BSNT_05138___ 435 AAGCGCCCTTCAAACCCCAAACATCGGCTATTATCTGAACTTGGAAAAAA 484
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU33970___ar 501 AAGCGCCCTTCAAACCCCAAACATCGGCTATTATCTGAACTTGGAGAAAA 550
BSNT_05138___ 485 ACGGCATTCCTTTTGCGATGATTAACGCGTCATATGCCGAGCTTGCCGCG 534
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 551 ACGGCATTCCTTTTGCGATGATTAACGCGTCATATGCCGAGCTTGCCGCG 600
BSNT_05138___ 535 CCGAGTTTTACCTTGGATGATGTGAAAGGCGGGATGATGGCGGCGGAGCA 584
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 601 CCAAGTTTTACCTTGGATGATGTGAAAGGCGGGATGATGGCGGCGGAGCA 650
BSNT_05138___ 585 TTTGCTTTCTCTCGGCCACACGCATATGATGGGTATTTTTAAAGCTGATG 634
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 651 TTTGCTTTCTCTCGGCCACACGCATATGATGGGTATTTTTAAAGCTGATG 700
BSNT_05138___ 635 ACACACAAGGCGTGAAACGGATGAACGGATTTATACAGGCGCACCGGGAG 684
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 701 ACACACAAGGCGTGAAACGGATGAACGGATTTATACAGGCGCACCGGGAG 750
BSNT_05138___ 685 CGTGAGTTGTTTCCTTCTCCGGATATGATCGTGACATTTACAACGGAAGA 734
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 751 CGTGAGTTGTTTCCTTCTCCGGATATGATCGTGACATTTACAACGGAAGA 800
BSNT_05138___ 735 AAAAGAATCAAAACTTCTGGAGAAAGTAAAAGCCACACTGGAGAAAAACA 784
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 801 AAAAGAATCAAAACTTCTGGAGAAAGTAAAAGCCACACTGGAGAAAAACA 850
BSNT_05138___ 785 GCAAGCACATGCCGACAGCCATTCTTTGTTATAACGATGAAATTGCGCTG 834
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 851 GCAAGCACATGCCGACAGCCATTCTTTGTTATAACGATGAAATTGCGCTG 900
BSNT_05138___ 835 AAGGTGATTGATATGCTGAGGGAGATGGATCTTAAAGTGCCGGAGGATAT 884
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 901 AAGGTGATTGATATGCTGAGGGAGATGGATCTTAAAGTGCCGGAGGATAT 950
BSNT_05138___ 885 GTCTATTGTCGGGTACGATGATTCACATTTCGCCCAAATCTCAGAAGTGA 934
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 951 GTCTATTGTCGGGTACGATGATTCACATTTCGCCCAAATCTCAGAAGTGA 1000
BSNT_05138___ 935 AACTAACCTCTGTCAAACATCCGAAATCAGTGCTTGGAAAAGCAGCCGCC 984
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 1001 AACTAACCTCTGTCAAACATCCGAAATCAGTGCTTGGAAAAGCAGCCGCC 1050
BSNT_05138___ 985 AAATATGTCATTGACTGCTTAGAGCATAAAAAGCCGAAGCAAGAGGATGT 1034
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 1051 AAATATGTCATTGACTGCTTAGAGCATAAAAAGCCGAAGCAAGAGGATGT 1100
BSNT_05138___ 1035 CATATTTGAGCCTGAGTTGATCATTCGCCAGTCCGCACGAAAACTGAATG 1084
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33970___ar 1101 CATATTTGAGCCTGAGTTGATCATTCGCCAGTCCGCACGAAAACTGAATG 1150
BSNT_05138___ 1085 AATAA 1089
|||||
BSU33970___ar 1151 AATAA 1155
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