Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05135 and BSU33950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence dna-align/BSNT_05135___cggR.1.22522.seq
# -bsequence dna-align/BSU33950___cggR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05135___cggR-BSU33950___cggR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05135___cggR-BSU33950___cggR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05135___cggR
# 2: BSU33950___cggR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1023
# Identity: 943/1023 (92.2%)
# Similarity: 943/1023 (92.2%)
# Gaps: 75/1023 ( 7.3%)
# Score: 4695.0
#
#
#=======================================
BSNT_05135___ 0 -------------------------------------------------- 0
BSU33950___cg 1 ATGAACCAGTTAATACAAGCTCAAAAAAAATTATTGCCTGATCTTCTGCT 50
BSNT_05135___ 1 -------------------------TTGCAGTATATCAGGCTGACAGAAC 25
|||||||||||||||||||||||||
BSU33950___cg 51 CGTTATGCAAAAGAGGTTTGAAATCTTGCAGTATATCAGGCTGACAGAAC 100
BSNT_05135___ 26 CCATCGGGCGAAGAAGCCTGTCTGCCAGTCTCGGAATCAGCGAGCGTGTG 75
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 101 CCATCGGGCGAAGAAGCCTGTCTGCCAGTCTCGGAATCAGCGAGCGTGTG 150
BSNT_05135___ 76 CTGAGGGGCGAGGTTCAGTTTTTAAAGGAACAGAACCTGGTCGATATTAA 125
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 151 CTGAGGGGCGAGGTTCAGTTTTTAAAGGAACAGAACCTGGTCGATATTAA 200
BSNT_05135___ 126 GACAAACGGCATGACATTGACAGAAGAGGGCTATGAACTGCTTTCTGTTT 175
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 201 GACAAACGGCATGACATTGACAGAAGAGGGCTATGAACTGCTTTCTGTTT 250
BSNT_05135___ 176 TGGAAGATACGATGAAAGATGTTTTAGGTTTGACTCTTTTGGAAAAGACA 225
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 251 TGGAAGATACGATGAAAGATGTTTTAGGTTTGACTCTTTTGGAAAAGACA 300
BSNT_05135___ 226 TTAAAAGAACGTTTAAATCTGAAGGATGCCATTATCGTATCCGGAGACAG 275
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU33950___cg 301 TTAAAAGAACGTTTAAATCTAAAGGATGCCATTATCGTATCCGGAGACAG 350
BSNT_05135___ 276 CGATCAATCCCCATGGGTCAAAAAAGAAATGGGAAGAGCGGCTGTCGCAT 325
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 351 CGATCAATCCCCATGGGTCAAAAAAGAAATGGGAAGAGCGGCTGTCGCAT 400
BSNT_05135___ 326 GTATGAAAAAAAGATTTTCAGGCAAAAATATCGTCGCTGTAACTGGCGGT 375
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 401 GTATGAAAAAAAGATTTTCAGGCAAAAATATCGTCGCTGTAACTGGCGGT 450
BSNT_05135___ 376 ACGACAATTGAAGCTGTCGCCGAAATGATGACGCCGGATTCTAAAAACCG 425
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 451 ACGACAATTGAAGCTGTCGCCGAAATGATGACGCCGGATTCTAAAAACCG 500
BSNT_05135___ 426 CGAGCTTTTGTTTGTGCCTGCAAGAGGCGGTTTAGGCGAAGACGTGAAAA 475
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 501 CGAGCTTTTGTTTGTGCCTGCAAGAGGCGGTTTAGGCGAAGACGTGAAAA 550
BSNT_05135___ 476 ACCAGGCGAACACCATATGCGCGCATATGGCGGAGAAGGCTTCAGGCACT 525
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 551 ACCAGGCGAACACCATATGCGCGCATATGGCGGAGAAGGCTTCAGGCACT 600
BSNT_05135___ 526 TACCGGCTTTTGTTTGTTCCGGGACAGCTGTCACAAGGCGCCTATTCATC 575
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 601 TACCGGCTTTTGTTTGTTCCGGGACAGCTGTCACAAGGCGCCTATTCATC 650
BSNT_05135___ 576 TATTATTGAAGAGCCTTCTGTCAAAGAGGTGCTGAACACCATTAAATCAG 625
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 651 TATTATTGAAGAGCCTTCTGTCAAAGAGGTGCTGAACACCATTAAATCAG 700
BSNT_05135___ 626 CGAGTATGCTGGTTCACGGAATCGGCGAAGCTAAAACTATGGCTCAGCGC 675
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 701 CGAGTATGCTGGTTCACGGAATCGGCGAAGCTAAAACTATGGCTCAGCGC 750
BSNT_05135___ 676 AGAAACACGACTTTAGAAGACTTAAAGAAAATAGATGATAACGACGCGGT 725
|||||||||.||||||||||.|||||||||||||||||||||||||||||
BSU33950___cg 751 AGAAACACGCCTTTAGAAGATTTAAAGAAAATAGATGATAACGACGCGGT 800
BSNT_05135___ 726 GACAGAAGCGTTCGGCTACTATTTTAACGCGGACGGCGAAGTGGTTCACA 775
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 801 GACGGAAGCGTTCGGCTACTATTTTAACGCGGACGGCGAAGTGGTTCACA 850
BSNT_05135___ 776 AAGTGCATTCTGTCGGAATGCAGCTGGATGACATAGACGCCATCCCCGAT 825
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 851 AAGTGCATTCTGTCGGAATGCAGCTGGATGACATAGACGCCATCCCCGAT 900
BSNT_05135___ 826 ATTATTGCGGTAGCGGGCGGATCATCAAAAGCCGAGGCGATCGAGGCTTA 875
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU33950___cg 901 ATTATTGCGGTAGCGGGCGGATCATCAAAAGCCGAAGCGATCGAGGCTTA 950
BSNT_05135___ 876 CTTTAAAAAGCCACGCAACACGGTTCTCGTCACAGACGAAGGAGCCGCAA 925
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33950___cg 951 CTTTAAAAAGCCACGCAACACGGTTCTCGTCACAGACGAAGGAGCCGCAA 1000
BSNT_05135___ 926 AGAAGTTATTAAGGGATGAATAA 948
|||||||||||||||||||||||
BSU33950___cg 1001 AGAAGTTATTAAGGGATGAATAA 1023
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