Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05132 and BSU33920

See Amino acid alignment / Visit BSNT_05132 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence dna-align/BSNT_05132___tpiA.1.22522.seq
#    -bsequence dna-align/BSU33920___tpiA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05132___tpiA-BSU33920___tpiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05132___tpiA-BSU33920___tpiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05132___tpiA
# 2: BSU33920___tpiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity:     761/762 (99.9%)
# Similarity:   761/762 (99.9%)
# Gaps:           0/762 ( 0.0%)
# Score: 3801.0
# 
#
#=======================================

BSNT_05132___      1 ATGAGAAAACCAATTATCGCCGGTAACTGGAAAATGAACAAAACACTCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp      1 ATGAGAAAACCAATTATCGCCGGTAACTGGAAAATGAACAAAACACTCGG     50

BSNT_05132___     51 CGAAGCTGTCAGCTTCGTTGAAGAAGTGAAATCTTCCATTCCAGCAGCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp     51 CGAAGCTGTCAGCTTCGTTGAAGAAGTGAAATCTTCCATTCCAGCAGCAG    100

BSNT_05132___    101 ACAAAGCTGAAGCTGTTGTTTGCGCGCCAGCGCTTTTCTTAGAAAAGCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    101 ACAAAGCTGAAGCTGTTGTTTGCGCGCCAGCGCTTTTCTTAGAAAAGCTT    150

BSNT_05132___    151 GCTTCTGCTGTGAAAGGCACTGACCTAAAAGTCGGCGCTCAAAACATGCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    151 GCTTCTGCTGTGAAAGGCACTGACCTAAAAGTCGGCGCTCAAAACATGCA    200

BSNT_05132___    201 CTTCGAAGAAAGCGGCGCGTTCACAGGCGAAATCAGCCCGGTTGCTCTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    201 CTTCGAAGAAAGCGGCGCGTTCACAGGCGAAATCAGCCCGGTTGCTCTGA    250

BSNT_05132___    251 AAGACCTTGGCGTTGACTACTGCGTCATCGGCCACTCTGAGCGCCGTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    251 AAGACCTTGGCGTTGACTACTGCGTCATCGGCCACTCTGAGCGCCGTGAA    300

BSNT_05132___    301 ATGTTCGCTGAAACTGATGAAACAGTTAACAAAAAAGCACATGCAGCTTT    350
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU33920___tp    301 ATGTTCGCTGAAACTGATGAAACAGTTAACAAAAAAGCACACGCAGCTTT    350

BSNT_05132___    351 CAAACACGGCATTGTGCCGATCATCTGTGTAGGTGAAACGCTTGAAGAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    351 CAAACACGGCATTGTGCCGATCATCTGTGTAGGTGAAACGCTTGAAGAGC    400

BSNT_05132___    401 GTGAAGCCGGCAAAACAAATGATCTTGTTGCTGACCAAGTGAAAAAAGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    401 GTGAAGCCGGCAAAACAAATGATCTTGTTGCTGACCAAGTGAAAAAAGGC    450

BSNT_05132___    451 CTTGCTGGTCTTTCTGAAGAACAAGTTGCTGCTTCTGTTATTGCGTATGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    451 CTTGCTGGTCTTTCTGAAGAACAAGTTGCTGCTTCTGTTATTGCGTATGA    500

BSNT_05132___    501 GCCAATCTGGGCAATCGGAACAGGCAAATCTTCTACAGCGAAAGATGCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    501 GCCAATCTGGGCAATCGGAACAGGCAAATCTTCTACAGCGAAAGATGCGA    550

BSNT_05132___    551 ATGACGTGTGTGCGCATATCCGTAAAACCGTCGCTGAAAGCTTCAGCCAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    551 ATGACGTGTGTGCGCATATCCGTAAAACCGTCGCTGAAAGCTTCAGCCAA    600

BSNT_05132___    601 GAAGCTGCAGACAAGCTTCGCATCCAATATGGCGGAAGCGTAAAGCCTGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    601 GAAGCTGCAGACAAGCTTCGCATCCAATATGGCGGAAGCGTAAAGCCTGC    650

BSNT_05132___    651 AAACATTAAAGAATATATGGCAGAGTCCGATATTGACGGTGCTTTGGTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    651 AAACATTAAAGAATATATGGCAGAGTCCGATATTGACGGTGCTTTGGTCG    700

BSNT_05132___    701 GCGGCGCGAGCCTTGAGCCACAGTCATTCGTTCAATTATTGGAGGAAGGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33920___tp    701 GCGGCGCGAGCCTTGAGCCACAGTCATTCGTTCAATTATTGGAGGAAGGT    750

BSNT_05132___    751 CAATATGAGTAA    762
                     ||||||||||||
BSU33920___tp    751 CAATATGAGTAA    762


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.