Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05118 and BSU33840

See Amino acid alignment / Visit BSNT_05118 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_05118___yvbF.1.22522.seq
#    -bsequence dna-align/BSU33840___yvbF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05118___yvbF-BSU33840___yvbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05118___yvbF-BSU33840___yvbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05118___yvbF
# 2: BSU33840___yvbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     553/558 (99.1%)
# Similarity:   553/558 (99.1%)
# Gaps:           0/558 ( 0.0%)
# Score: 2745.0
# 
#
#=======================================

BSNT_05118___      1 GTGAAAAAAACCGCTCTCGACATCATTGAACATGCTGAAGAGCATCTCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv      1 GTGAAAAAAACCGCTCTCGACATCATTGAACATGCTGAAGAGCATCTCAT     50

BSNT_05118___     51 TGAGAAGATTGCCGAAAATATGCATACGTTTGGAATGCCTTCAACTGTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv     51 TGAGAAGATTGCCGAAAATATGCATACGTTTGGAATGCCTTCAACTGTCG    100

BSNT_05118___    101 GACGTGTGCTCGGAATTATTTATATGAATCGAAAACCGATGACCTTAAGC    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU33840___yv    101 GACGTGTGCTCGGAATTATTTATATGAATCGAAAACCAATGACCTTAAGC    150

BSNT_05118___    151 GAGCTCTCTGAGGCAACGGGCATGAGCAAAACACGGATGAGCCAGGTTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv    151 GAGCTCTCTGAGGCAACGGGCATGAGCAAAACACGGATGAGCCAGGTTGT    200

BSNT_05118___    201 CCGGGAAATGATCGATGCCAATATCGCCGAAAAGGTGTTTGAAAAAGGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv    201 CCGGGAAATGATCGATGCCAATATCGCCGAAAAGGTGTTTGAAAAAGGCG    250

BSNT_05118___    251 TACGAAAAGACCTTTATGACGTCGAGCAGGATTATTATCAAACCTTCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv    251 TACGAAAAGACCTTTATGACGTCGAGCAGGATTATTATCAAACCTTCATT    300

BSNT_05118___    301 TCTTTATTTGCGGCGAATTGGACAAAGGTCGTGAGCAAAAACAAAGTGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv    301 TCTTTATTTGCGGCGAATTGGACAAAGGTCGTGAGCAAAAACAAAGTGCT    350

BSNT_05118___    351 GTATAAAAAATTAAACCGGGAACTGAGTGATCTTTTACAAAGGGACGGGC    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU33840___yv    351 GTATAAAAAATTAAACCGGGAGCTGAGTGATCTTTTACAAAGGGACGGGC    400

BSNT_05118___    401 TTACCCCGGAAGCGGAAGAGAAAGTCAATCAGCTGCTGAATGAATTAAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv    401 TTACCCCGGAAGCGGAAGAGAAAGTCAATCAGCTGCTGAATGAATTAAAA    450

BSNT_05118___    451 GAATGGCTTCATTACTATGATTGGCTGAGCAGGTTGATTGAATTTTTTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33840___yv    451 GAATGGCTTCATTACTATGATTGGCTGAGCAGGTTGATTGAATTTTTTGA    500

BSNT_05118___    501 GAGTGAGGAAGTCTTTCGGTACGTGCCAAAAACAAAAGAAAGCAGCTCTC    550
                     |||||||||||||||||||||.|||||.||||||||||||.|||||||||
BSU33840___yv    501 GAGTGAGGAAGTCTTTCGGTATGTGCCGAAAACAAAAGAATGCAGCTCTC    550

BSNT_05118___    551 TAAAATAA    558
                     ||||||||
BSU33840___yv    551 TAAAATAA    558


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