Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05114 and BSU33800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_05114___opuCD.1.22522.seq
# -bsequence dna-align/BSU33800___opuCD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05114___opuCD-BSU33800___opuCD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05114___opuCD-BSU33800___opuCD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05114___opuCD
# 2: BSU33800___opuCD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity: 649/696 (93.2%)
# Similarity: 649/696 (93.2%)
# Gaps: 27/696 ( 3.9%)
# Score: 3131.5
#
#
#=======================================
BSNT_05114___ 1 ATGGAAGTACTACAGCAGCTTGGCACATACTATTCGCAAAACGGCGGTTA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33800___op 1 ATGGAAGTACTACAGCAGCTTGGCACATACTATTCGCAAAACGGCGGTTA 50
BSNT_05114___ 51 TGTGCTGCAGGAGTTTTACCGCCATTTTCTGATGTCGGTATACGGCGTTT 100
.|||||||||||.||||||||||||||||||||||||||.||.|||||||
BSU33800___op 51 CGTGCTGCAGGAATTTTACCGCCATTTTCTGATGTCGGTGTATGGCGTTT 100
BSNT_05114___ 101 TATTTGCCGCCATTGTTGGAATTCCGCTCGGCATCCTGATAGCCAGATAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33800___op 101 TATTTGCCGCCATTGTTGGAATTCCGCTCGGCATCCTGATAGCCAGATAC 150
BSNT_05114___ 151 AGAAGATTAAGCGGATGGGTTTTTGCGGTCACGAACGTCATTCAGACGAT 200
|||||||||||||||||||||||||||||||||||.|||||||||||.||
BSU33800___op 151 AGAAGATTAAGCGGATGGGTTTTTGCGGTCACGAATGTCATTCAGACCAT 200
BSNT_05114___ 201 CCCGGCTCTCGCCATGCTTGCCGTGCTGATGCTTGTCATGGGGCTGGGCG 250
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU33800___op 201 CCCGGCTCTCGCCATGCTCGCCGTGCTGATGCTTGTCATGGGGCTGGGCG 250
BSNT_05114___ 251 CTAATACGGTGATATTGTCATTATTTCTGTATTCTCTTCTGCCGATTATC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33800___op 251 CTAATACGGTGATATTGTCATTATTTCTGTATTCTCTTCTGCCGATTATC 300
BSNT_05114___ 301 AGAAATACGTATACAGGGATTATCAGTATTGAGCACGCCTATCTTGAATC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33800___op 301 AGAAATACGTATACAGGGATTATCAGTATTGAGCACGCCTATCTTGAATC 350
BSNT_05114___ 351 CGGAAAAGCAATGGGGATGACAAAATTTCAAGTGCTGCGGATGGTCGAGC 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU33800___op 351 GGGAAAAGCAATGGGGATGACAAAATTTCAAGTGCTGCGGATGGTCGAGC 400
BSNT_05114___ 401 TTCCGCTTGCGCTTTCGGTCATAATGGCCGGCCTGCGCACCGCGCTTGTC 450
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU33800___op 401 TTCCGCTTGCGCTTTCTGTCATAATGGCCGGCCTGCGCACCGCGCTTGTC 450
BSNT_05114___ 451 ATTGCCATCGGCATTACGGCCATCGGGACATTTGTCGGTGCAGGCGGTCT 500
|||||.|||||||||||||||||||||||||||||||||||.||||||||
BSU33800___op 451 ATTGCGATCGGCATTACGGCCATCGGGACATTTGTCGGTGCTGGCGGTCT 500
BSNT_05114___ 501 CGGGGACATCATCGTCAGGGGATCAAACGCCACAAACGGAACCGCGATTA 550
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU33800___op 501 CGGGGACATCATCGTCAGAGGATCAAACGCCACAAACGGAACCGCGATTA 550
BSNT_05114___ 551 TATTAGCGGGAGCGATCCCCACAGCTCTGATGGCGGTGATTGCCGATTTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33800___op 551 TATTAGCGGGAGCGATCCCCACAGCTCTGATGGCGGTGATTGCCGATTTG 600
BSNT_05114___ 601 GTCATGGGCTGGCTTGAACGAGCATTAAGCCCGATTAAAAAGAGAAAGAA 650
||||||||||||||||||||||||||||||||||||||||||| |||.|.
BSU33800___op 601 GTCATGGGCTGGCTTGAACGAGCATTAAGCCCGATTAAAAAGA-AAAAAG 649
BSNT_05114___ 651 GAAA----AATCTGGCAGGTGCCGCATAA----------------- 675
|||| |.|.|.||.|.| |.||
BSU33800___op 650 GAAATTTTATTATAGCTGAT-----AGAAAAACCACCTCTATTTAA 690
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