Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06190 and BSU33780
See
Amino acid alignment /
Visit
BSNT_06190 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_06190.1.22522.seq
# -bsequence dna-align/BSU33780___sdpI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06190-BSU33780___sdpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06190-BSU33780___sdpI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06190
# 2: BSU33780___sdpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 779
# Identity: 375/779 (48.1%)
# Similarity: 375/779 (48.1%)
# Gaps: 298/779 (38.3%)
# Score: 746.5
#
#
#=======================================
BSNT_06190 1 ATGA--AAAAATATTTCTTTGCACTAATTATGATA--------------G 34
|||| ||||||| |..|||.|| |||||||..|| |
BSU33780___sd 1 ATGAAGAAAAATA-TAATTTCCA-TAATTATTGTATGTTTGAGTTTCTTG 48
BSNT_06190 35 CCTTAACAATTTTAGCTTGGGTTATAACATATTCACACTTACCTAATGAA 84
.||| |||||.|| |||||.|| |.||.|.||..|.|||
BSU33780___sd 49 ACTT--CAATTATA-------TTATATCA-----ATACCTTCCAGAAGAA 84
BSNT_06190 85 TTGGCAACACACTGGGGTATA-AGTGGTGAAGCAGATGACTTTTCAAAGA 133
|.||.| ||| |.||||.|.| |||.|
BSU33780___sd 85 --------ATACCG----ATACAATGGTCAGG-------------AAATA 109
BSNT_06190 134 AACCTACGGCCATAGCAACGTTGGTAGGTATAA----TGATAGTACAATA 179
||| |||| .|||| |.||| |.||| |.| ||||||
BSU33780___sd 110 AAC---CGGC---TGCAA---TTGTA--TCTAAACCTTTA----ACAATA 144
BSNT_06190 180 TATTCTTA----TGGTGCTTATTCCTAAAATTGATCCCCGACGAAACTAT 225
| ||.||| ||.|| ||||.|.| |||.|| |||
BSU33780___sd 145 T-TTATTATACCTGTTG-TTATGCTT---ATTTAT------------TAT 177
BSNT_06190 226 CCGACCTTT---------ACTCGT---------------------GCA-T 244
|..||.||| |||..| ||| |
BSU33780___sd 178 CTTACTTTTTATATGTTAACTATTAAGTCTACACAAAAAAATAAAGCATT 227
BSNT_06190 245 ACTTAT-CTA-TTTTTAATACCATGTTTCTCGTCTTATTTCTCATTAATT 292
.|||.| ||| .||.|||||..|||||..||.|.||||.| |||
BSU33780___sd 228 GCTTTTCCTAGCTTCTAATAATATGTTAATCCTTTTATAT-------ATT 270
BSNT_06190 293 TGATTACAATATTGACGGGGCTGGGTATTAAACTTCCTATTCCATA--TT 340
|||||| || .|.|||| ||||| .||| ||
BSU33780___sd 271 ---TTACAA-----------CT-----CTCAACT--CTATT-GATAAGTT 298
BSNT_06190 341 TAGG--------------TTCATTTATT-------CTTGG---AGCTATA 366
|||| ||.|||||.| ||||| .|.|||.
BSU33780___sd 299 TAGGATACGAAGTGAATATTGATTTAATAATAGGGCTTGGTGTTGGTATC 348
BSNT_06190 367 TTCATGGTTTTTGGT---AATTTTATTCAGC-AGGTTAGACCGAA----- 407
||..|..||.||||| ||||.|||.|||| || .|||.|.||
BSU33780___sd 349 TTTTTAATTATTGGTGGAAATTCTATGCAGCTAG--CAGAACAAAACCAT 396
BSNT_06190 408 -TTTTTTCTTGGGAATTAGAACTCCTTGGACATTAAGCAG-TGAAAATGT 455
||.|| |||.|.||.||.||||||||||||| .|| |||.|.|||
BSU33780___sd 397 CTTATT-----GGATTGAGGACACCTTGGACATTAA-AAGATGAGACTGT 440
BSNT_06190 456 ATGGAGGCTTACACATAGATTGAGTTCAAGAATATTTGTTCTAGCCGGAA 505
.||||..||...|.||.|.||....||.|.|.||.||| |||
BSU33780___sd 441 TTGGAAACTGGGAAATCGCTTTGCCTCTAAAGTACTTG---TAG------ 481
BSNT_06190 506 TCAT-TATTGTTTTAACTGCATTTATTCCTGAGTCTTTTACCGAGCCGAT 554
| |.|.|||||| |.||..||| .|||||.|
BSU33780___sd 482 ---TGTGTGGTTTTA-------TAATAGCTG-TTCTTTCA---------- 510
BSNT_06190 555 TATTTTTATAGCGGCAATAGGTAGTAT-ACTCTTATCCGTAT-------- 595
.||||||.|| |..|||| ||| |.|||||| |||
BSU33780___sd 511 -TTTTTTACAG-GAGAATA-----TATAATTCTTAT---TATGATTGTGC 550
BSNT_06190 596 ---------TCGCAT--CTTATTTCA----------TATATCA------- 617
|.|||| .|||||||| .||||||
BSU33780___sd 551 TAGTTCTTCTAGCATTAGTTATTTCAACACTAGCTTCATATCATTATTAC 600
BSNT_06190 618 AAAAGAGCTAAATAAATAG---------- 636
|||| ||.||||..|
BSU33780___sd 601 AAAA-----AATTAAACGGTTCACGTTGA 624
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.