Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05101 and BSU33650

See Amino acid alignment / Visit BSNT_05101 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence dna-align/BSNT_05101.1.22522.seq
#    -bsequence dna-align/BSU33650___yvzC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05101-BSU33650___yvzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05101-BSU33650___yvzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: BSU33650___yvzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity:     181/234 (77.4%)
# Similarity:   181/234 (77.4%)
# Gaps:          48/234 (20.5%)
# Score: 885.0
# 
#
#=======================================

BSNT_05101         1 ------------------------------------------------AT      2
                                                                     ||
BSU33650___yv      1 GTGCCAGTAGAAAAGATACAGATTAGACGTGATTATGTCTTGCAGTATAT     50

BSNT_05101         3 GGTTAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCT     52
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33650___yv     51 GGTTAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCT    100

BSNT_05101        53 CACCCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGACGGCCGGGGCAG    102
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU33650___yv    101 CACCCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGAAGGCCGGGGCAG    150

BSNT_05101       103 CTTGTGATCGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCT    152
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33650___yv    151 CTTGTGATTGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCT    200

BSNT_05101       153 TTTTTACTATGATTTTATTGACAAAAGTCAATGA    186
                     |||||||||||||||..|||||||||||||||.|
BSU33650___yv    201 TTTTTACTATGATTTCGTTGACAAAAGTCAATAA    234


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