Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05101 and BSU33650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_05101.1.22522.seq
# -bsequence dna-align/BSU33650___yvzC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05101-BSU33650___yvzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05101-BSU33650___yvzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: BSU33650___yvzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 181/234 (77.4%)
# Similarity: 181/234 (77.4%)
# Gaps: 48/234 (20.5%)
# Score: 885.0
#
#
#=======================================
BSNT_05101 1 ------------------------------------------------AT 2
||
BSU33650___yv 1 GTGCCAGTAGAAAAGATACAGATTAGACGTGATTATGTCTTGCAGTATAT 50
BSNT_05101 3 GGTTAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCT 52
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33650___yv 51 GGTTAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCT 100
BSNT_05101 53 CACCCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGACGGCCGGGGCAG 102
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU33650___yv 101 CACCCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGAAGGCCGGGGCAG 150
BSNT_05101 103 CTTGTGATCGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCT 152
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33650___yv 151 CTTGTGATTGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCT 200
BSNT_05101 153 TTTTTACTATGATTTTATTGACAAAAGTCAATGA 186
|||||||||||||||..|||||||||||||||.|
BSU33650___yv 201 TTTTTACTATGATTTCGTTGACAAAAGTCAATAA 234
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