Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05092 and BSU33610
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_05092___rnrrnr.1.22522.seq
# -bsequence dna-align/BSU33610___rnr.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05092___rnrrnr-BSU33610___rnr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05092___rnrrnr-BSU33610___rnr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05092___rnrrnr
# 2: BSU33610___rnr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2340
# Identity: 2321/2340 (99.2%)
# Similarity: 2321/2340 (99.2%)
# Gaps: 0/2340 ( 0.0%)
# Score: 11529.0
#
#
#=======================================
BSNT_05092___ 1 ATGGAAAAAGAAGCATTTATGGAAAAGCTTCTCTCGTTTATGAAGGAAGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1 ATGGAAAAAGAAGCATTTATGGAAAAGCTTCTCTCGTTTATGAAGGAAGA 50
BSNT_05092___ 51 GGCGTACAAGCCTCTGACCGTTCAGGAACTTGAGGAGATGTTAAATATTA 100
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 51 GGCGTACAAACCTCTGACCGTTCAGGAACTTGAGGAGATGTTAAATATTA 100
BSNT_05092___ 101 CGGAAGCCGAGGAGTTTAAAGAGCTCGTCAAAGCGTTAGTCGCCTTGGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 101 CGGAAGCCGAGGAGTTTAAAGAGCTCGTCAAAGCGTTAGTCGCCTTGGAA 150
BSNT_05092___ 151 GAAAAAGGGCTTATCGTACGGACGAGAAGCGACCGCTACGGCATTCCGGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 151 GAAAAAGGGCTTATCGTACGGACGAGAAGCGACCGCTACGGCATTCCGGA 200
BSNT_05092___ 201 GAAGATGAATTTAATAAAAGGAAAGATTTCAGCCCATGCGAAAGGATTCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 201 GAAGATGAATTTAATAAAAGGAAAGATTTCAGCCCATGCGAAAGGATTCG 250
BSNT_05092___ 251 CCTTTTTGCTGCCTGAGGATACGTCGTTAAGTGATGTGTTTATTCCGCCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 251 CCTTTTTGCTGCCTGAGGATACGTCGTTAAGTGATGTGTTTATTCCGCCT 300
BSNT_05092___ 301 AATGAGCTAAATACGGCAATGAACGGCGATATCGTCATGGTGCGTCTGAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 301 AATGAGCTAAATACGGCAATGAACGGCGATATCGTCATGGTGCGTCTGAA 350
BSNT_05092___ 351 CTCACAGTCAAGCGGCTCCAGGCAGGAAGGAACCGTCATACGGATTTTAG 400
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 351 CTCACAATCAAGCGGCTCCAGGCAGGAAGGAACCGTCATACGGATTTTAG 400
BSNT_05092___ 401 AAAGAGCGATTCAGCGGGTTGTCGGCACGTATACAGAAACGAGAAACTTC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 401 AAAGAGCGATTCAGCGGGTTGTCGGCACGTATACAGAAACGAGAAACTTC 450
BSNT_05092___ 451 GGCTTTGTCATTCCGGACGACAAAAAAATCACGAGTGACATCTTCATTCC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 451 GGCTTTGTCATTCCGGACGACAAAAAAATCACGAGTGACATCTTCATTCC 500
BSNT_05092___ 501 GAAAAATGGGAAAAATGGAGCTGCGGAAGGGCATAAGGTTGTTGTCAAGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 501 GAAAAATGGGAAAAATGGAGCTGCGGAAGGGCATAAGGTTGTTGTCAAGC 550
BSNT_05092___ 551 TGACGAGCTATCCTGAAGGCCGCATGAACGCAGAGGGTGAGGTTGAAACC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 551 TGACGAGCTATCCTGAAGGCCGCATGAACGCAGAGGGTGAGGTTGAAACC 600
BSNT_05092___ 601 ATTCTCGGCCACAAAAACGACCCGGGCATTGATATTTTATCAGTCATTCA 650
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU33610___rn 601 ATTCTCGGCCACAAAAACGACCCGGGCATTGATATTTTATCGGTCATTCA 650
BSNT_05092___ 651 TAAGCACGGCCTGCCGGGAGAATTTCCAGCTGACGCGATGGAACAGGCAT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 651 TAAGCACGGCCTGCCGGGAGAATTTCCAGCTGACGCGATGGAACAGGCAT 700
BSNT_05092___ 701 CAAGTACGCCTGACACGATTGATGAAAAAGATCTGAAAGACCGCCGTGAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 701 CAAGTACGCCTGACACGATTGATGAAAAAGATCTGAAAGACCGCCGTGAT 750
BSNT_05092___ 751 CTCCGTGACCAGGTGATTGTCACCATTGATGGTGCGGATGCGAAGGATTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 751 CTCCGTGACCAGGTGATTGTCACCATTGATGGTGCGGATGCGAAGGATTT 800
BSNT_05092___ 801 GGATGATGCAGTTACCGTGACGAAGCTTGATGATGGAAGCTACAAGCTTG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 801 GGATGATGCAGTTACCGTGACGAAGCTTGATGATGGAAGCTACAAGCTTG 850
BSNT_05092___ 851 GCGTTCACATAGCTGATGTCAGCCATTACGTAACCGAAAACTCGCCGATT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 851 GCGTTCACATAGCTGATGTCAGCCATTACGTAACCGAAAACTCGCCGATT 900
BSNT_05092___ 901 GACAAAGAAGCGCTTGAAAGAGGGACAAGTGTGTATCTGGTTGACCGTGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 901 GACAAAGAAGCGCTTGAAAGAGGGACAAGTGTGTATCTGGTTGACCGTGT 950
BSNT_05092___ 951 CATCCCGATGATTCCGCACAGATTGTCAAACGGCATCTGCTCCTTAAATC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 951 CATCCCGATGATTCCGCACAGATTGTCAAACGGCATCTGCTCCTTAAATC 1000
BSNT_05092___ 1001 CAAAGGTTGACCGCCTGACGCTTTCTTGTGAAATGACAATTAACAGTCAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1001 CAAAGGTTGACCGCCTGACGCTTTCTTGTGAAATGACAATTAACAGTCAG 1050
BSNT_05092___ 1051 GGACAGGTGACAGAGCACGAGATATTCCAAAGTGTCATCAAAACAACGGA 1100
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU33610___rn 1051 GGACAGGTGACAGAGCACGAGATCTTCCAAAGTGTCATCAAAACAACGGA 1100
BSNT_05092___ 1101 AAGAATGACATATTCAGATGTGAATAAAATTCTTGTTGACGATGATGAAG 1150
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU33610___rn 1101 AAGAATGACATATTCAGATGTGAATAAAATTCTTGTTGATGATGATGAAG 1150
BSNT_05092___ 1151 AGCTGAAACAAAAATACGAGCCTCTTGTTCCGATGTTCAAAGACATGGAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1151 AGCTGAAACAAAAATACGAGCCTCTTGTTCCGATGTTCAAAGACATGGAG 1200
BSNT_05092___ 1201 CGTCTGGCTCAAATTCTGCGCGATAAGCGGATGGACCGCGGCGCCGTTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1201 CGTCTGGCTCAAATTCTGCGCGATAAGCGGATGGACCGCGGCGCCGTTGA 1250
BSNT_05092___ 1251 CTTTGATTTCAAAGAAGCAAAGGTGCTTGTTGATGACGAAGGAGCGGTTA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1251 CTTTGATTTCAAAGAAGCAAAGGTGCTTGTTGATGACGAAGGAGCGGTTA 1300
BSNT_05092___ 1301 AAGACGTTGTGATCAGAGAACGCTCTGTCGCCGAGAAGCTGATTGAAGAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1301 AAGACGTTGTGATCAGAGAACGCTCTGTCGCCGAGAAGCTGATTGAAGAA 1350
BSNT_05092___ 1351 TTTATGCTTGTAGCAAACGAAACAGTGGCGGAGCATTTCCATTGGATGAA 1400
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33610___rn 1351 TTTATGCTTGTAGCAAACGAAACAGTTGCGGAGCATTTCCATTGGATGAA 1400
BSNT_05092___ 1401 CGTCCCGTTTATATACCGGATTCACGAAGAGCCGAATGCTGAAAAGCTGC 1450
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1401 TGTCCCGTTTATATACCGGATTCACGAAGAGCCGAATGCTGAAAAGCTGC 1450
BSNT_05092___ 1451 AAAAGTTTTTAGAATTTGTGACGACATTTGGCTATGTGGTGAAAGGAACG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1451 AAAAGTTTTTAGAATTTGTGACGACATTTGGCTATGTGGTGAAAGGAACG 1500
BSNT_05092___ 1501 GCGGGGAATATTCATCCGCGCGCGTTGCAAAGCATTCTGGACGCTGTGCG 1550
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU33610___rn 1501 GCGGGGAATATTCATCCGCGCGCGCTGCAAAGCATTCTGGACGCTGTGCG 1550
BSNT_05092___ 1551 TGACAGACCAGAGGAAACGGTTATATCTACTGTTATGCTCCGTTCGATGA 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1551 TGACAGACCAGAGGAAACGGTTATATCTACTGTTATGCTCCGTTCGATGA 1600
BSNT_05092___ 1601 AACAGGCGAAATACGACCCGCAAAGCTTGGGGCACTTCGGTCTGTCAACG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1601 AACAGGCGAAATACGACCCGCAAAGCTTGGGGCACTTCGGTCTGTCAACG 1650
BSNT_05092___ 1651 GAATTCTATACGCATTTCACATCGCCGATCCGCCGTTATCCGGACTTAAT 1700
|||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU33610___rn 1651 GAATTCTATACGCATTTCACATCACCGATCCGCCGTTACCCGGACTTAAT 1700
BSNT_05092___ 1701 CGTTCACCGCCTGATCCGAACGTATTTGATCAACGGCAAAGTCGATGAAG 1750
|||||||||.|||||||||||||||||||||||||||||.||||||||||
BSU33610___rn 1701 CGTTCACCGTCTGATCCGAACGTATTTGATCAACGGCAAGGTCGATGAAG 1750
BSNT_05092___ 1751 CGACTCAGGAAAAGTGGGCTGAACGCCTGCCGGATATCGCCGAACATACA 1800
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1751 CGACACAGGAAAAGTGGGCTGAACGCCTGCCGGATATCGCCGAACATACA 1800
BSNT_05092___ 1801 TCATCAATGGAGCGCCGTGCAGTTGACGCCGAGCGTGAGACGGATGATCT 1850
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1801 TCATCTATGGAGCGCCGTGCAGTTGACGCCGAGCGTGAGACGGATGATCT 1850
BSNT_05092___ 1851 GAAAAAAGCGGAATACATGCTTGATAAAATCGGTGAAGAGTTTGACGGCA 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1851 GAAAAAAGCGGAATACATGCTTGATAAAATCGGTGAAGAGTTTGACGGCA 1900
BSNT_05092___ 1901 TGATCAGCTCTGTGACAAACTTCGGAATGTTCGTCGAGCTGCCGAATACA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 1901 TGATCAGCTCTGTGACAAACTTCGGAATGTTCGTCGAGCTGCCGAATACA 1950
BSNT_05092___ 1951 ATTGAAGGACTCGTCCACGTCAGCTTTATGACAGATGACTACTACCGATT 2000
|||||||||||||||||.|||||||||||||||||||||||||||||.||
BSU33610___rn 1951 ATTGAAGGACTCGTCCATGTCAGCTTTATGACAGATGACTACTACCGCTT 2000
BSNT_05092___ 2001 TGACGAACAGCATTTCGCAATGATCGGCGAGCGGACAGGCAACGTCTTCC 2050
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU33610___rn 2001 TGACGAACAGCATTTCGCAATGATTGGCGAGCGGACAGGCAACGTCTTCC 2050
BSNT_05092___ 2051 GCATCGGGGATGAAATCACAGTCAAGGTTGTCGATGTCAATAAAGATGAG 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 2051 GCATCGGGGATGAAATCACAGTCAAGGTTGTCGATGTCAATAAAGATGAG 2100
BSNT_05092___ 2101 CGCAATATCGACTTTGAAATTGTCGGCATGAAGGGCACTCCGCGGCGTCC 2150
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU33610___rn 2101 CGCAATATCGACTTTGAAATTGTCGGCATGAAAGGCACTCCGCGGCGTCC 2150
BSNT_05092___ 2151 GAGAGAATTGGACAGCAGCCGGAGCAGAAAACGCGGAAAGCCTGCCAGAA 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 2151 GAGAGAATTGGACAGCAGCCGGAGCAGAAAACGCGGAAAGCCTGCCAGAA 2200
BSNT_05092___ 2201 AACGTGTTCAAAGCACCAATACACCTGTGTCTCCAGCTCCGTCTGAGGAA 2250
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU33610___rn 2201 AACGTGTTCAAAGCACCAATACACCTGTTTCTCCAGCTCCGTCTGAGGAA 2250
BSNT_05092___ 2251 AAAGGGGAGTGGTTCACTAAGCCGAAGAAGAAAAAGAAAAAACGCGGCTT 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 2251 AAAGGGGAGTGGTTCACTAAGCCGAAGAAGAAAAAGAAAAAACGCGGCTT 2300
BSNT_05092___ 2301 CCAGAATGCTCCGAAACAGAAACGGAAAAAGAAGAAATAG 2340
||||||||||||||||||||||||||||||||||||||||
BSU33610___rn 2301 CCAGAATGCTCCGAAACAGAAACGGAAAAAGAAGAAATAG 2340
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