Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05014 and BSU33580

See Amino acid alignment / Visit BSNT_05014 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:36
# Commandline: needle
#    -asequence dna-align/BSNT_05014___yvaF.1.22522.seq
#    -bsequence dna-align/BSU33580___yvaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05014___yvaF-BSU33580___yvaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05014___yvaF-BSU33580___yvaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05014___yvaF
# 2: BSU33580___yvaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 573
# Identity:     562/573 (98.1%)
# Similarity:   562/573 (98.1%)
# Gaps:           0/573 ( 0.0%)
# Score: 2766.0
# 
#
#=======================================

BSNT_05014___      1 GTGGAAAAAAGAATGATGGCGGAAACCATCCGACTGATCAAGCAGAAAGG     50
                     .||||.||||||||..|||||||||||.||||.|||||||||||||||||
BSU33580___yv      1 ATGGATAAAAGAATTCTGGCGGAAACCTTCCGGCTGATCAAGCAGAAAGG     50

BSNT_05014___     51 ATTTTCATTTACGATGAATGATTTGGCGGCAGCGCTGGGAACGAGCAAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv     51 ATTTTCATTTACGATGAATGATTTGGCGGCAGCGCTGGGAACGAGCAAGC    100

BSNT_05014___    101 GGACGCTCTATGCATATTATTCATCTAAAGATCAGCTTGTTGAGGCGGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv    101 GGACGCTCTATGCATATTATTCATCTAAAGATCAGCTTGTTGAGGCGGTT    150

BSNT_05014___    151 GTCGAACAATTTATAGCTGAAATGAAGCAAATAGAAAGAGACATCTATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv    151 GTCGAACAATTTATAGCTGAAATGAAGCAAATAGAAAGAGACATCTATGA    200

BSNT_05014___    201 AAATGAAAGTTTAAATGTGCTCGAAAAGGTGAAACAAATGCTGATCAGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv    201 AAATGAAAGTTTAAATGTGCTCGAAAAGGTGAAACAAATGCTGATCAGCC    250

BSNT_05014___    251 TTCCGCAGGGGATGGAACTGCTGAACATGGGATTATTAAATGAACTAAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv    251 TTCCGCAGGGGATGGAACTGCTGAACATGGGATTATTAAATGAACTAAAG    300

BSNT_05014___    301 AAATACCATTACGATGCGTGGCTTACATTAGATGCGTTTATTAAGGAAGA    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU33580___yv    301 AAATACCATTACGATGCGTGGCTTACATTAGACGCGTTTATTAAGGAAGA    350

BSNT_05014___    351 ATGGGCGATTGTCCTAGCATTATTAAACGAGTGCAAACAGCAAAAGAGAA    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU33580___yv    351 ATGGGCGATTGTCCTAGCATTATTAAATGAGTGCAAACAGCAAAAGAGAA    400

BSNT_05014___    401 TCAGAAACATCAATCCGGACCTGTTTGTTCACATGTATATAGGGAGCATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv    401 TCAGAAACATCAATCCGGACCTGTTTGTTCACATGTATATAGGGAGCATC    450

BSNT_05014___    451 AATCAAGTGTATGACCCTGAATATCCACTGAAACATCAGTTCACGACAGG    500
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33580___yv    451 AATCAAGTGTATGACCCTGAATATCCGCTGAAACATCAGTTCACGACAGG    500

BSNT_05014___    501 AGAGGTTCTTGAATCAATTGTAGATGTTTTGTTTAACGGTATAACAGCTG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU33580___yv    501 AGAGGTACTTGAATCAATTGTAGATGTTTTGTTTAACGGTATAACAGCTG    550

BSNT_05014___    551 ATGAGGAGGCTGATGCCACGTGA    573
                     |||||||||||||||||||.|||
BSU33580___yv    551 ATGAGGAGGCTGATGCCACATGA    573


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