Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05011 and BSU33560
See
Amino acid alignment /
Visit
BSNT_05011 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_05011.1.22522.seq
# -bsequence dna-align/BSU33560___yvaD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05011-BSU33560___yvaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05011-BSU33560___yvaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05011
# 2: BSU33560___yvaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 280/402 (69.7%)
# Similarity: 280/402 (69.7%)
# Gaps: 117/402 (29.1%)
# Score: 1380.0
#
#
#=======================================
BSNT_05011 1 ATGAGATATATGAAGCTGTTTTTTCTCGTGACTGATATCGGTTTTATCTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33560___yv 1 ATGAGATATATGAAGCTGTTTTTTCTCGTGACTGATATCGGTTTTATCTT 50
BSNT_05011 51 GTACTGGCTGTCAGCCGGGTTTTCGCTCATACCGGAAAACTGGGCTTTTA 100
||||||||||||||||||.|||||||||||||||||||.|||||||||||
BSU33560___yv 51 GTACTGGCTGTCAGCCGGATTTTCGCTCATACCGGAAAGCTGGGCTTTTA 100
BSNT_05011 101 AACATCATGACCATCCGTTTATGATTGCCTGGAACTGGTCTTTTTTTCCG 150
|||||||||||||||||||||||||.||.|||||||||||||||||||||
BSU33560___yv 101 AACATCATGACCATCCGTTTATGATCGCTTGGAACTGGTCTTTTTTTCCG 150
BSNT_05011 151 CTGGATATCCTGATTTCTGTCACAGGGTTGTACAGCTTGTACCTACAGCG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33560___yv 151 CTGGATATCCTGATTTCTGTCACAGGGTTGTACAGCTTGTACCTACAGCG 200
BSNT_05011 201 GGTGAATCGTGCTGACTGGAAGCTGATGGCGCTGATTTCTCTTGTGCTGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33560___yv 201 GGTGAATCGTGCTGACTGGAAGCTGATGGCGCTGATTTCTCTTGTGCTGA 250
BSNT_05011 251 CCTGTTGTTCAGGTCTGCAGGCGCTATCATTCTGA--------------- 285
||||||||||||||||||||||||||||||||||.
BSU33560___yv 251 CCTGTTGTTCAGGTCTGCAGGCGCTATCATTCTGGACATTCAGCAGTGAC 300
BSNT_05011 285 -------------------------------------------------- 285
BSU33560___yv 301 TTTGATCTTGTGTGGTGGCTGTTTAATGGGTATCTATTGATTTATCCTTT 350
BSNT_05011 285 -------------------------------------------------- 285
BSU33560___yv 351 ATTTTTTATTCACCTGCTCTTGAAGGAAGGCAGAAGGACAAAACAGTCCT 400
BSNT_05011 285 -- 285
BSU33560___yv 401 GA 402
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.