Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05006 and BSU33540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_05006.1.22522.seq
# -bsequence dna-align/BSU33540___yvaB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05006-BSU33540___yvaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05006-BSU33540___yvaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05006
# 2: BSU33540___yvaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 466/636 (73.3%)
# Similarity: 466/636 (73.3%)
# Gaps: 165/636 (25.9%)
# Score: 2299.5
#
#
#=======================================
BSNT_05006 0 -------------------------------------------------- 0
BSU33540___yv 1 ATGGCAAAAGTATTATATATCACTGCTCATCCACATGACGAAGCAACTTC 50
BSNT_05006 0 -------------------------------------------------- 0
BSU33540___yv 51 GTACAGTATGGCAACAGGTAAAGCATTTATCGAATCTTACAAAGAAGCGA 100
BSNT_05006 0 -------------------------------------------------- 0
BSU33540___yv 101 ATCCAAATGATGAAGTTGTACATATCGATTTGTACAAAGAAAACATTCCG 150
BSNT_05006 1 -------------ATGTATTTAGCG--TGGGGAAAGCTTCAGTCAGGTAC 35
|||||||||||| |||||||||||||||||||||||
BSU33540___yv 151 CACATTGACGCAGATGTATTTAGCGGATGGGGAAAGCTTCAGTCAGGTAC 200
BSNT_05006 36 AGGCTTTGAAGAGCTTTCTGAAAGCGAAAAAGCGAAAGTAGGCCGTTTGG 85
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33540___yv 201 AGGCTTTGAAGAGCTTTCTGAAAGCGAAAAAGCGAAAGTAGGCCGTTTGG 250
BSNT_05006 86 GAGAGCTTAGCGATCAATTTGCATCAGCTGATAAGTACGTATTTGTTACT 135
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33540___yv 251 GAGAGCTTAGCGATCAATTTGCATCAGCTGATAAGTACGTATTTGTTACT 300
BSNT_05006 136 CCTTTATGGAACTTCTCATTCCCGCCAGTGATGAAAGCGTATCTCGATTC 185
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33540___yv 301 CCTTTATGGAACTTCTCATTCCCGCCAGTGATGAAAGCGTATCTCGATTC 350
BSNT_05006 186 TGTTGCTGTTGCAGGAAAATCATTCAAATACACAGAACAAGGCCCTATTG 235
||||||||||||||||||||||||||||||||||||||||||.|||.|.|
BSU33540___yv 351 TGTTGCTGTTGCAGGAAAATCATTCAAATACACAGAACAAGGTCCTGTCG 400
BSNT_05006 236 GCTTGTTGACTGATAAAAAAGCAATTCATATCCAAGCGCGCGGCGGCTAC 285
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33540___yv 401 GCTTGTTAACTGATAAAAAAGCAATTCATATCCAAGCGCGCGGCGGCTAC 450
BSNT_05006 286 TATTCAGAAGGCCCTGCGGCTGAGATGGAAATGGGGCACCGCTACATCGG 335
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33540___yv 451 TATTCAGAAGGCCCTGCGGCTGAGATGGAAATGGGGCACCGCTACATCGG 500
BSNT_05006 336 CATCATGATGAACTTCTTCGGCGTACCATCATTCGAAGGCATTTTCGTAG 385
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU33540___yv 501 CATCATGATGAACTTCTTCGGCGTACCATCATTCGATGGCATTTTCGTAG 550
BSNT_05006 386 AGGGACATAATGCGGAGCCTGATAAAGCACAGCAAATCAAAGAAGACGCG 435
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33540___yv 551 AGGGACATAATGCGGAGCCTGATAAAGCACAGCAAATCAAAGAAGACGCG 600
BSNT_05006 436 ATTGCGCGTGCGAAAGAAGCAGGAAAAACATTCTAA 471
||||||||||||||||||||||||||||||||||||
BSU33540___yv 601 ATTGCGCGTGCGAAAGAAGCAGGAAAAACATTCTAA 636
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